Analysis of interatomic Contacts of Structural Units in PDB entry:
1CGT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CGT entry

There is 1 chain in PDB entry 1CGT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1GLN 684
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1CGT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
54 70Right-handed alpha
Helix 2
H2
A
114 127Right-handed alpha
Helix 3
H3
A
185 192Right-handed alpha
Helix 4
H4
A
204 221Right-handed alpha
Helix 5
H5
A
236 250Right-handed alpha
Helix 6
H6
A
266 275Right-handed alpha
Helix 7
H7
A
284 294Right-handed alpha
Helix 8
H8
A
300 314Right-handed alpha
Helix 9
H9
A
339 352Right-handed alpha
Helix 10
H10
A
385 400Right-handed alpha
Helix 11
H11
A
402 405Right-handed alpha
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There are 12 sheets in PDB entry 1CGT. Click on sheet of interest to get list of strands forming it: S1, S2, S3, S4, S5, S6, S7, S8, S9, S10, S11, S12,

There are 8 strands in S1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
72 76parallel
Strand 3
A
131 136parallel
Strand 4
A
225 229parallel
Strand 5
A
253 257parallel
Strand 6
A
279 282parallel
Strand 7
A
320 322parallel
Strand 8
A
355 360parallel
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There are 2 strands in S2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
92 94anti-parallel
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There are 2 strands in S3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 144first strand
Strand 2
A
196 200anti-parallel
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There are 2 strands in S4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 159first strand
Strand 2
A
162 165anti-parallel
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There are 4 strands in S5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
408 415first strand
Strand 2
A
417 425anti-parallel
Strand 3
A
428 436parallel
Strand 4
A
485 491anti-parallel
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There are 2 strands in S6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 444first strand
Strand 2
A
479 481anti-parallel
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There are 2 strands in S7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 456first strand
Strand 2
A
469 471anti-parallel
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There are 4 strands in S8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 504first strand
Strand 2
A
512 519anti-parallel
Strand 3
A
546 552parallel
Strand 4
A
539 544anti-parallel
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There are 5 strands in S9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 508first strand
Strand 2
A
574 580parallel
Strand 3
A
558 566anti-parallel
Strand 4
A
527 531parallel
Strand 5
A
533 535anti-parallel
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There are 3 strands in S10 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
677 683first strand
Strand 2
A
583 592parallel
Strand 3
A
635 643anti-parallel
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There are 4 strands in S11 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 624first strand
Strand 2
A
601 607anti-parallel
Strand 3
A
645 654parallel
Strand 4
A
660 662anti-parallel
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There are 4 strands in S12 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
621 624first strand
Strand 2
A
601 607anti-parallel
Strand 3
A
645 654parallel
Strand 4
A
667 671anti-parallel
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