Analysis of interatomic Contacts of Structural Units in PDB entry:
1CIJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CIJ entry

There is 1 chain in PDB entry 1CIJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1CIJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 12Right-handed 310
Helix 2
2
A
60 63Right-handed 310
Helix 3
3
A
67 72Right-handed alpha
Helix 4
4
A
94 96Right-handed 310
Helix 5
5
A
99 112Right-handed alpha
Helix 6
6
A
124 132Right-handed 310
Helix 7
7
A
134 136Right-handed 310
Helix 8
8
A
138 140Right-handed 310
Helix 9
9
A
159 161Right-handed 310
Helix 10
10
A
163 166Right-handed alpha
Helix 11
11
A
172 180Right-handed alpha
Helix 12
12
A
187 194Right-handed alpha
Helix 13
13
A
200 207Right-handed alpha
Helix 14
14
A
213 215Right-handed 310
Helix 15
15
A
217 227Right-handed alpha
Helix 16
16
A
231 246Right-handed alpha
Helix 17
17
A
265 274Right-handed alpha
Helix 18
18
A
291 307Right-handed 310
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There is 1 sheet ( A) in PDB entry 1CIJ.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 26first strand
Strand 2
A
35 41anti-parallel
Strand 3
A
76 80anti-parallel
Strand 4
A
49 52parallel
Strand 5
A
118 122parallel
Strand 6
A
141 147parallel
Strand 7
A
251 257parallel
Strand 8
A
282 284parallel
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