Analysis of interatomic Contacts of Structural Units in PDB entry:
1CJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1CJW entry

There is 1 chain in PDB entry 1CJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 30LEU 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 1CJW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
42 55Right-handed 310
Helix 2
2
A
57 60Right-handed alpha
Helix 3
3
A
67 76Right-handed alpha
Helix 4
4
A
78 80Right-handed 310
Helix 5
5
A
106 110Right-handed 310
Helix 6
6
A
135 148Right-handed alpha
Helix 7
7
A
162 171Right-handed 310
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There is 1 sheet ( A) in PDB entry 1CJW.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
81 86anti-parallel
Strand 3
A
89 99anti-parallel
Strand 4
A
118 126anti-parallel
Strand 5
A
155 160parallel
Strand 6
A
189 194anti-parallel
Strand 7
A
173 175anti-parallel
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