Analysis of interatomic Contacts of Structural Units in PDB entry:
1D2Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1D2Z entry

There are 4 chains in PDB entry 1D2Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 28ILE 129
B
 LEU 23GLU 172
C
 GLY 22ILE 129
D
 LEU 23GLU 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1D2Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1
A
39 52Right-handed alpha
Helix 2
H2
A
55 61Right-handed alpha
Helix 3
H3
A
66 78Right-handed alpha
Helix 4
H4
A
82 94Right-handed alpha
Helix 5
H5
A
98 108Right-handed alpha
Helix 6
H6
A
111 117Right-handed alpha
Helix 7
H7
B
38 49Right-handed alpha
Helix 8
H8
B
54 60Right-handed alpha
Helix 9
H9
B
67 71Right-handed alpha
Helix 10
H10
B
78 84Right-handed alpha
Helix 11
H11
B
91 102Right-handed alpha
Helix 12
H12
B
109 119Right-handed alpha
Helix 13
H13
B
129 139Right-handed alpha
Helix 14
H14
B
142 151Right-handed alpha
Helix 15
H15
C
39 52Right-handed alpha
Helix 16
H16
C
55 61Right-handed alpha
Helix 17
H17
C
66 78Right-handed alpha
Helix 18
H18
C
82 94Right-handed alpha
Helix 19
H19
C
98 108Right-handed alpha
Helix 20
H20
C
111 117Right-handed alpha
Helix 21
H21
D
38 49Right-handed alpha
Helix 22
H22
D
54 60Right-handed alpha
Helix 23
H23
D
67 71Right-handed alpha
Helix 24
H24
D
78 84Right-handed alpha
Helix 25
H25
D
91 102Right-handed alpha
Helix 26
H26
D
109 119Right-handed alpha
Helix 27
H27
D
129 139Right-handed alpha
Helix 28
H28
D
142 151Right-handed alpha
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There are no sheets in PDB entry 1D2Z
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il