Analysis of interatomic Contacts of Structural Units in PDB entry:
1D5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1D5C entry

There is 1 chain in PDB entry 1D5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 11LEU 172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1D5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 34Right-handed alpha
Helix 2
2
A
70 75Right-handed 310
Helix 3
3
A
76 82Right-handed alpha
Helix 4
4
A
95 101Right-handed alpha
Helix 5
5
A
101 114Right-handed alpha
Helix 6
6
A
125 129Right-handed 310
Helix 7
7
A
128 132Right-handed 310
Helix 8
8
A
135 146Right-handed alpha
Helix 9
9
A
161 171Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1D5C.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 55first strand
Strand 2
A
58 66anti-parallel
Strand 3
A
12 17parallel
Strand 4
A
86 92parallel
Strand 5
A
118 124parallel
Strand 6
A
149 152parallel
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