Analysis of interatomic Contacts of Structural Units in PDB entry:
1DBS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DBS entry

There is 1 chain in PDB entry 1DBS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1LEU 224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 1DBS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A1
A
15 29Right-handed alpha
Helix 2
A2
A
53 61Right-handed alpha
Helix 3
A3
A
82 89Right-handed alpha
Helix 4
A4
A
95 106Right-handed alpha
Helix 5
A5
A
130 137Right-handed alpha
Helix 6
A6
A
151 165Right-handed alpha
Helix 7
A7
A
184 194Right-handed alpha
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There is 1 sheet (BET) in PDB entry 1DBS.

There are 8 strands in BET sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 7first strand
Strand 2
A
33 36parallel
Strand 3
A
38 41parallel
Strand 4
A
74 76parallel
Strand 5
A
111 116parallel
Strand 6
A
141 145parallel
Strand 7
A
172 175parallel
Strand 8
A
200 203parallel
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