Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 1DEQ entry
There are 14 chains in PDB entry 1DEQ
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
ASN 45 | GLN 224 |
B
|
LYS 88 | GLU 467 |
C
|
ASP 27 | GLU 396 |
D
|
ASN 45 | GLN 224 |
E
|
LYS 88 | GLU 467 |
F
|
ASP 27 | GLU 396 |
M
|
UNK 1 | UNK 145 |
N
|
ASN 45 | GLN 224 |
O
|
LYS 88 | GLU 467 |
P
|
ASP 27 | GLU 396 |
Q
|
ASN 45 | GLN 224 |
R
|
LYS 88 | GLU 467 |
S
|
ASP 27 | GLU 396 |
Z
|
UNK 1 | UNK 145 |
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There are no helices in PDB entry
1DEQ
There are no sheets in PDB entry
1DEQ
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il