Analysis of interatomic Contacts of Structural Units in PDB entry:
1DJL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DJL entry

There are 2 chains in PDB entry 1DJL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 859SER 1040
B
 PRO 859SER 1040
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1DJL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
870 881Right-handed alpha
Helix 2
2
A
889 896Right-handed alpha
Helix 3
3
A
897 911Right-handed alpha
Helix 4
4
A
928 937Right-handed alpha
Helix 5
5
A
940 942Right-handed 310
Helix 6
6
A
947 951Right-handed alpha
Helix 7
7
A
952 957Right-handed 310
Helix 8
8
A
966 970Right-handed 310
Helix 9
9
A
971 976Right-handed alpha
Helix 10
10
A
988 992Right-handed 310
Helix 11
11
A
1011 1016Right-handed 310
Helix 12
12
A
1025 1039Right-handed alpha
Helix 13
13
B
870 881Right-handed alpha
Helix 14
14
B
889 896Right-handed alpha
Helix 15
15
B
897 911Right-handed alpha
Helix 16
16
B
928 937Right-handed alpha
Helix 17
17
B
940 942Right-handed 310
Helix 18
18
B
947 951Right-handed alpha
Helix 19
19
B
952 957Right-handed 310
Helix 20
20
B
966 970Right-handed 310
Helix 21
21
B
971 976Right-handed alpha
Helix 22
22
B
988 992Right-handed 310
Helix 23
23
B
1011 1016Right-handed 310
Helix 24
24
B
1025 1039Right-handed alpha
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There are 2 sheets in PDB entry 1DJL. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
944 946first strand
Strand 2
A
914 919parallel
Strand 3
A
883 888parallel
Strand 4
A
959 963parallel
Strand 5
A
994 999parallel
Strand 6
A
1019 1023parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
944 946first strand
Strand 2
B
914 919parallel
Strand 3
B
883 888parallel
Strand 4
B
959 963parallel
Strand 5
B
994 999parallel
Strand 6
B
1019 1023parallel
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