Analysis of interatomic Contacts of Structural Units in PDB entry:
1DK5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DK5 entry

There are 2 chains in PDB entry 1DK5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 5GLU 320
B
 HIS 408GLU 721
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 1DK5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 32Right-handed alpha
Helix 2
2
A
37 47Right-handed alpha
Helix 3
3
A
50 65Right-handed alpha
Helix 4
4
A
69 74Right-handed alpha
Helix 5
5
A
80 89Right-handed alpha
Helix 6
6
A
91 103Right-handed alpha
Helix 7
7
A
110 119Right-handed 310
Helix 8
8
A
122 136Right-handed alpha
Helix 9
9
A
140 148Right-handed alpha
Helix 10
10
A
151 162Right-handed alpha
Helix 11
11
A
172 188Right-handed alpha
Helix 12
12
A
195 203Right-handed alpha
Helix 13
13
A
205 219Right-handed alpha
Helix 14
14
A
222 228Right-handed 310
Helix 15
15
A
232 246Right-handed alpha
Helix 16
16
A
248 259Right-handed alpha
Helix 17
17
A
266 276Right-handed alpha
Helix 18
18
A
281 292Right-handed alpha
Helix 19
29
A
296 303Right-handed alpha
Helix 20
20
A
308 317Right-handed alpha
Helix 21
21
B
420 431Right-handed alpha
Helix 22
22
B
438 447Right-handed alpha
Helix 23
23
B
450 464Right-handed alpha
Helix 24
24
B
469 474Right-handed alpha
Helix 25
25
B
480 489Right-handed alpha
Helix 26
26
B
491 504Right-handed alpha
Helix 27
27
B
505 509Right-handed 310
Helix 28
28
B
510 519Right-handed alpha
Helix 29
29
B
522 536Right-handed alpha
Helix 30
30
B
540 548Right-handed alpha
Helix 31
31
B
551 562Right-handed alpha
Helix 32
32
B
572 588Right-handed alpha
Helix 33
33
B
595 603Right-handed alpha
Helix 34
34
B
605 619Right-handed alpha
Helix 35
35
B
623 628Right-handed alpha
Helix 36
36
B
632 646Right-handed alpha
Helix 37
37
B
648 659Right-handed alpha
Helix 38
38
B
666 677Right-handed alpha
Helix 39
39
B
681 691Right-handed alpha
Helix 40
40
B
696 704Right-handed alpha
Helix 41
41
B
707 717Right-handed alpha
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There are no sheets in PDB entry 1DK5
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