Analysis of interatomic Contacts of Structural Units in PDB entry:
1DLS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DLS entry

There is 1 chain in PDB entry 1DLS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1ASP 186
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1DLS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 39Right-handed alpha
Helix 2
2
A
54 59Right-handed alpha
Helix 3
3
A
62 64Right-handed 310
Helix 4
4
A
93 101Right-handed alpha
Helix 5
5
A
103 106Right-handed alpha
Helix 6
6
A
118 124Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1DLS.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 172first strand
Strand 2
A
175 185anti-parallel
Strand 3
A
130 138anti-parallel
Strand 4
A
4 10parallel
Strand 5
A
112 114parallel
Strand 6
A
49 53parallel
Strand 7
A
71 75parallel
Strand 8
A
88 90parallel
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