Analysis of interatomic Contacts of Structural Units in PDB entry:
1DMG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DMG entry

There is 1 chain in PDB entry 1DMG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLY 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 1DMG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 25Right-handed alpha
Helix 2
2
A
29 42Right-handed alpha
Helix 3
3
A
96 120Right-handed alpha
Helix 4
4
A
135 146Right-handed alpha
Helix 5
5
A
161 172Right-handed alpha
Helix 6
6
A
201 208Right-handed alpha
Helix 7
7
A
215 226Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1DMG.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 18first strand
Strand 2
A
3 7anti-parallel
Strand 3
A
123 126parallel
Strand 4
A
210 214parallel
Strand 5
A
153 157parallel
Strand 6
A
177 181parallel
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