Analysis of interatomic Contacts of Structural Units in PDB entry:
1DTZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DTZ entry

There is 1 chain in PDB entry 1DTZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1ARG 689
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 1DTZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 28Right-handed alpha
Helix 2
2
A
41 51Right-handed alpha
Helix 3
3
A
60 69Right-handed alpha
Helix 4
4
A
105 109Right-handed 310
Helix 5
5
A
125 132Right-handed alpha
Helix 6
6
A
133 136Right-handed 310
Helix 7
7
A
144 153Right-handed alpha
Helix 8
8
A
166 171Right-handed alpha
Helix 9
9
A
176 180Right-handed 310
Helix 10
10
A
190 201Right-handed alpha
Helix 11
11
A
212 218Right-handed alpha
Helix 12
12
A
220 225Right-handed alpha
Helix 13
13
A
238 242Right-handed 310
Helix 14
14
A
263 279Right-handed alpha
Helix 15
15
A
315 321Right-handed alpha
Helix 16
16
A
321 330Right-handed alpha
Helix 17
17
A
334 344Right-handed alpha
Helix 18
18
A
351 366Right-handed alpha
Helix 19
19
A
376 386Right-handed alpha
Helix 20
20
A
395 404Right-handed alpha
Helix 21
21
A
499 501Right-handed 310
Helix 22
22
A
524 535Right-handed alpha
Helix 23
23
A
545 549Right-handed alpha
Helix 24
24
A
580 584Right-handed 310
Helix 25
25
A
583 587Right-handed 310
Helix 26
26
A
603 619Right-handed alpha
Helix 27
27
A
656 662Right-handed alpha
Helix 28
28
A
662 674Right-handed alpha
Helix 29
29
A
678 687Right-handed alpha
Back to top of page

There are 7 sheets in PDB entry 1DTZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
34 38parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 59first strand
Strand 2
A
254 258anti-parallel
Strand 3
A
74 80anti-parallel
Strand 4
A
307 309anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
113 116parallel
Strand 3
A
206 210parallel
Strand 4
A
91 99anti-parallel
Strand 5
A
227 231anti-parallel
Strand 6
A
235 237anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
113 116parallel
Strand 3
A
206 210parallel
Strand 4
A
91 99anti-parallel
Strand 5
A
248 251anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 350first strand
Strand 2
A
369 374parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 394first strand
Strand 2
A
596 599anti-parallel
Strand 3
A
408 415anti-parallel
Strand 4
A
645 650anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 491first strand
Strand 2
A
455 458parallel
Strand 3
A
540 544parallel
Strand 4
A
435 440anti-parallel
Strand 5
A
569 570anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il