Analysis of interatomic Contacts of Structural Units in PDB entry:
1DWG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DWG entry

There is 1 chain in PDB entry 1DWG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
M
 GLU 3PRO 501
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1DWG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
M
21 25Right-handed 310
Helix 2
AA2
M
36 41Right-handed alpha
Helix 3
AA3
M
49 58Right-handed alpha
Helix 4
AA4
M
58 63Right-handed alpha
Helix 5
AA5
M
74 90Right-handed alpha
Helix 6
AA6
M
99 104Right-handed alpha
Helix 7
AA7
M
108 112Right-handed 310
Helix 8
AA8
M
114 131Right-handed alpha
Helix 9
AA9
M
145 153Right-handed alpha
Helix 10
AB1
M
154 158Right-handed 310
Helix 11
AB2
M
159 176Right-handed alpha
Helix 12
AB3
M
189 197Right-handed alpha
Helix 13
AB4
M
221 245Right-handed alpha
Helix 14
AB5
M
246 249Right-handed 310
Helix 15
AB6
M
268 283Right-handed alpha
Helix 16
AB7
M
283 293Right-handed alpha
Helix 17
AB8
M
296 304Right-handed alpha
Helix 18
AB9
M
305 307Right-handed 310
Helix 19
AC1
M
311 319Right-handed alpha
Helix 20
AC2
M
348 353Right-handed 310
Helix 21
AC3
M
377 381Right-handed 310
Helix 22
AC4
M
386 400Right-handed alpha
Helix 23
AC5
M
419 425Right-handed alpha
Helix 24
AC6
M
426 448Right-handed alpha
Helix 25
AC7
M
489 500Right-handed alpha
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There are 5 sheets in PDB entry 1DWG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
251 253first strand
Strand 2
M
181 185parallel
Strand 3
M
134 140parallel
Strand 4
M
93 97parallel
Strand 5
M
30 34parallel
Strand 6
M
451 457parallel
Strand 7
M
405 409parallel
Strand 8
M
325 337parallel
Strand 9
M
255 263parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
251 253first strand
Strand 2
M
181 185parallel
Strand 3
M
134 140parallel
Strand 4
M
93 97parallel
Strand 5
M
30 34parallel
Strand 6
M
451 457parallel
Strand 7
M
405 409parallel
Strand 8
M
325 337parallel
Strand 9
M
355 358anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
370 372first strand
Strand 2
M
382 383anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
414 415first strand
Strand 2
M
471 472anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
476 479first strand
Strand 2
M
482 488anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il