Analysis of interatomic Contacts of Structural Units in PDB entry:
1DXI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1DXI entry

There are 2 chains in PDB entry 1DXI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 388
B
 MET 1GLY 388
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1DXI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A1
A
36 46Right-handed alpha
Helix 2
A11
A
55 58Right-handed alpha
Helix 3
A2
A
65 81Right-handed alpha
Helix 4
A21
A
97 99Right-handed alpha
Helix 5
A3
A
109 129Right-handed alpha
Helix 6
A4
A
151 172Right-handed alpha
Helix 7
A5
A
196 205Right-handed alpha
Helix 8
A51
A
218 224Right-handed alpha
Helix 9
A6
A
228 238Right-handed alpha
Helix 10
A7
A
265 278Right-handed alpha
Helix 11
A8
A
296 322Right-handed alpha
Helix 12
A9
A
324 333Right-handed alpha
Helix 13
A10
A
335 339Right-handed alpha
Helix 14
A11
A
362 367Right-handed alpha
Helix 15
A12
A
372 381Right-handed alpha
Helix 16
B1
B
36 46Right-handed alpha
Helix 17
B11
B
55 58Right-handed alpha
Helix 18
B2
B
65 81Right-handed alpha
Helix 19
B21
B
97 99Right-handed alpha
Helix 20
B3
B
109 129Right-handed alpha
Helix 21
B4
B
151 172Right-handed alpha
Helix 22
B5
B
196 205Right-handed alpha
Helix 23
B51
B
218 224Right-handed alpha
Helix 24
B6
B
228 238Right-handed alpha
Helix 25
B7
B
265 278Right-handed alpha
Helix 26
B8
B
296 322Right-handed alpha
Helix 27
B9
B
324 333Right-handed alpha
Helix 28
B10
B
335 339Right-handed alpha
Helix 29
B11
B
362 367Right-handed alpha
Helix 30
B12
B
372 381Right-handed alpha
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There are 2 sheets in PDB entry 1DXI. Click on sheet of interest to get list of strands forming it: BA, BB,

There are 9 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
50 54parallel
Strand 3
A
84 91parallel
Strand 4
A
133 138parallel
Strand 5
A
176 184parallel
Strand 6
A
214 217parallel
Strand 7
A
243 249parallel
Strand 8
A
284 287parallel
Strand 9
A
10 14parallel
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There are 9 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 14first strand
Strand 2
B
50 54parallel
Strand 3
B
84 91parallel
Strand 4
B
133 138parallel
Strand 5
B
176 184parallel
Strand 6
B
214 217parallel
Strand 7
B
243 249parallel
Strand 8
B
284 287parallel
Strand 9
B
10 14parallel
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