Analysis of interatomic Contacts of Structural Units in PDB entry:
1E5H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1E5H entry

There is 1 chain in PDB entry 1E5H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1E5H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 15Right-handed alpha
Helix 2
2
A
18 29Right-handed alpha
Helix 3
3
A
40 58Right-handed alpha
Helix 4
4
A
59 65Right-handed alpha
Helix 5
5
A
112 141Right-handed alpha
Helix 6
6
A
148 154Right-handed alpha
Helix 7
7
A
227 234Right-handed alpha
Helix 8
8
A
275 281Right-handed alpha
Helix 9
9
A
294 299Right-handed alpha
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There are 4 sheets in PDB entry 1E5H. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
31 35parallel
Strand 3
A
222 226anti-parallel
Strand 4
A
189 194anti-parallel
Strand 5
A
259 265anti-parallel
Strand 6
A
158 164anti-parallel
Strand 7
A
98 103anti-parallel
Strand 8
A
76 78anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 185first strand
Strand 2
A
305 307anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 245first strand
Strand 2
A
204 207anti-parallel
Strand 3
A
212 214anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 274first strand
Strand 2
A
291 293anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il