Analysis of interatomic Contacts of Structural Units in PDB entry:
1E6E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1E6E entry

There are 4 chains in PDB entry 1E6E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 4HIS 460
B
 ASP 5SER 117
C
 GLN 5HIS 460
D
 ASP 5ALA 110
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 1E6E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 28Right-handed alpha
Helix 2
2
A
45 50Right-handed alpha
Helix 3
3
A
55 59Right-handed 310
Helix 4
4
A
60 71Right-handed alpha
Helix 5
5
A
87 95Right-handed alpha
Helix 6
6
A
123 131Right-handed alpha
Helix 7
7
A
133 137Right-handed 310
Helix 8
8
A
154 166Right-handed alpha
Helix 9
9
A
167 172Right-handed alpha
Helix 10
10
A
177 187Right-handed alpha
Helix 11
11
A
199 203Right-handed 310
Helix 12
12
A
206 215Right-handed alpha
Helix 13
13
A
224 229Right-handed 310
Helix 14
14
A
231 238Right-handed alpha
Helix 15
15
A
239 255Right-handed alpha
Helix 16
16
A
258 268Right-handed alpha
Helix 17
17
A
366 371Right-handed alpha
Helix 18
18
A
375 396Right-handed alpha
Helix 19
19
A
406 417Right-handed alpha
Helix 20
20
A
423 442Right-handed alpha
Helix 21
21
A
450 458Right-handed alpha
Helix 22
22
B
28 36Right-handed alpha
Helix 23
23
B
60 65Right-handed alpha
Helix 24
24
B
71 79Right-handed alpha
Helix 25
25
B
92 94Right-handed 310
Helix 26
26
B
97 101Right-handed 310
Helix 27
27
B
112 116Right-handed 310
Helix 28
28
C
15 29Right-handed alpha
Helix 29
29
C
45 50Right-handed alpha
Helix 30
30
C
55 59Right-handed 310
Helix 31
31
C
60 70Right-handed alpha
Helix 32
32
C
87 95Right-handed alpha
Helix 33
33
C
123 131Right-handed alpha
Helix 34
34
C
133 137Right-handed 310
Helix 35
35
C
154 166Right-handed alpha
Helix 36
36
C
167 172Right-handed 310
Helix 37
37
C
177 187Right-handed alpha
Helix 38
38
C
199 203Right-handed 310
Helix 39
39
C
206 215Right-handed alpha
Helix 40
40
C
224 229Right-handed 310
Helix 41
41
C
231 237Right-handed alpha
Helix 42
42
C
239 255Right-handed alpha
Helix 43
43
C
258 267Right-handed alpha
Helix 44
44
C
305 309Right-handed 310
Helix 45
45
C
366 371Right-handed alpha
Helix 46
46
C
375 396Right-handed alpha
Helix 47
47
C
406 416Right-handed alpha
Helix 48
48
C
423 440Right-handed alpha
Helix 49
49
C
450 458Right-handed alpha
Helix 50
50
D
28 36Right-handed alpha
Helix 51
51
D
60 65Right-handed alpha
Helix 52
52
D
71 79Right-handed alpha
Helix 53
53
D
92 94Right-handed 310
Helix 54
54
D
97 101Right-handed 310
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There are 11 sheets in PDB entry 1E6E. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 364first strand
Strand 2
A
97 100parallel
Strand 3
A
8 12parallel
Strand 4
A
33 37parallel
Strand 5
A
74 77parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 122first strand
Strand 2
A
324 327parallel
Strand 3
A
147 151parallel
Strand 4
A
191 195parallel
Strand 5
A
270 275parallel
Strand 6
A
219 222parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 321first strand
Strand 2
A
294 299anti-parallel
Strand 3
A
278 284anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 23first strand
Strand 2
B
7 12anti-parallel
Strand 3
B
103 106parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 58first strand
Strand 2
B
88 90anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
362 364first strand
Strand 2
C
97 100parallel
Strand 3
C
8 12parallel
Strand 4
C
33 37parallel
Strand 5
C
74 77parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
120 122first strand
Strand 2
C
324 327parallel
Strand 3
C
147 151parallel
Strand 4
C
191 195parallel
Strand 5
C
270 275parallel
Strand 6
C
219 222parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
317 321first strand
Strand 2
C
294 299anti-parallel
Strand 3
C
278 284anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
300 303first strand
Strand 2
C
310 313anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
18 23first strand
Strand 2
D
7 12anti-parallel
Strand 3
D
103 106parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
56 58first strand
Strand 2
D
88 90anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il