Analysis of interatomic Contacts of Structural Units in PDB entry:
1E6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1E6Y entry

There are 16 chains in PDB entry 1E6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1002LYS 1270
A
 ALA 1272ARG 1284
A
 ALA 1286PHE 1464
A
 PHE 1466GLN 1471
A
 GLY 1473ALA 1569
B
 SER 2002VAL 2433
C
 ALA 3002ALA 3064
C
 SER 3066LYS 3248
D
 ALA 4002LYS 4270
D
 ALA 4272ARG 4284
D
 ALA 4286PHE 4464
D
 PHE 4466GLN 4471
D
 GLY 4473ALA 4569
E
 SER 5002LEU 5434
F
 ALA 6002ALA 6064
F
 SER 6066LYS 6248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are145 helices in PDB entry 1E6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1002 1018Right-handed alpha
Helix 2
2
A
1042 1045Right-handed 310
Helix 3
3
A
1046 1064Right-handed alpha
Helix 4
4
A
1069 1073Right-handed 310
Helix 5
5
A
1096 1101Right-handed 310
Helix 6
6
A
1101 1104Right-handed 310
Helix 7
7
A
1105 1117Right-handed alpha
Helix 8
8
A
1123 1135Right-handed alpha
Helix 9
9
A
1139 1154Right-handed alpha
Helix 10
10
A
1168 1172Right-handed 310
Helix 11
11
A
1183 1188Right-handed alpha
Helix 12
12
A
1189 1190Right-handed 310
Helix 13
13
A
1191 1194Right-handed 310
Helix 14
14
A
1197 1202Right-handed alpha
Helix 15
15
A
1203 1215Right-handed alpha
Helix 16
16
A
1225 1232Right-handed alpha
Helix 17
17
A
1235 1253Right-handed alpha
Helix 18
18
A
1259 1270Right-handed alpha
Helix 19
19
A
1291 1295Right-handed 310
Helix 20
20
A
1296 1304Right-handed alpha
Helix 21
21
A
1305 1310Right-handed alpha
Helix 22
22
A
1312 1331Right-handed alpha
Helix 23
23
A
1002 1337Right-handed alpha
Helix 24
24
A
1343 1349Right-handed alpha
Helix 25
25
A
1354 1371Right-handed alpha
Helix 26
26
A
1386 1408Right-handed alpha
Helix 27
27
A
1408 1415Right-handed alpha
Helix 28
28
A
1417 1438Right-handed alpha
Helix 29
29
A
1439 1459Right-handed alpha
Helix 30
30
A
1473 1478Right-handed alpha
Helix 31
31
A
1495 1499Right-handed 310
Helix 32
32
A
1504 1518Right-handed alpha
Helix 33
33
A
1526 1533Right-handed alpha
Helix 34
34
A
1544 1554Right-handed alpha
Helix 35
35
A
1563 1567Right-handed 310
Helix 36
36
B
2022 2025Right-handed 310
Helix 37
37
B
2029 2041Right-handed alpha
Helix 38
38
B
2047 2057Right-handed alpha
Helix 39
39
B
2075 2077Right-handed 310
Helix 40
40
B
2078 2091Right-handed alpha
Helix 41
41
B
2114 2120Right-handed alpha
Helix 42
42
B
2125 2143Right-handed alpha
Helix 43
43
B
2146 2148Right-handed 310
Helix 44
44
B
2149 2159Right-handed alpha
Helix 45
45
B
2178 2182Right-handed 310
Helix 46
46
B
2187 2191Right-handed 310
Helix 47
47
B
2193 2201Right-handed alpha
Helix 48
48
B
2204 2223Right-handed alpha
Helix 49
49
B
2228 2244Right-handed alpha
Helix 50
50
B
2247 2257Right-handed alpha
Helix 51
51
B
2261 2276Right-handed alpha
Helix 52
52
B
2296 2320Right-handed alpha
Helix 53
53
B
2321 2323Right-handed 310
Helix 54
54
B
2324 2341Right-handed alpha
Helix 55
55
B
2344 2347Right-handed 310
Helix 56
56
B
2348 2360Right-handed alpha
Helix 57
57
B
2369 2373Right-handed 310
Helix 58
58
B
2387 2398Right-handed alpha
Helix 59
59
B
2405 2411Right-handed alpha
Helix 60
60
B
2410 2418Right-handed alpha
Helix 61
61
B
2420 2425Right-handed alpha
Helix 62
62
B
2425 2432Right-handed alpha
Helix 63
63
C
3012 3024Right-handed alpha
Helix 64
64
C
3033 3042Right-handed alpha
Helix 65
65
C
3056 3061Right-handed alpha
Helix 66
66
C
3066 3071Right-handed alpha
Helix 67
67
C
3074 3080Right-handed alpha
Helix 68
68
C
3098 3110Right-handed alpha
Helix 69
69
C
3128 3141Right-handed alpha
Helix 70
70
C
3205 3213Right-handed alpha
Helix 71
71
C
3222 3225Right-handed 310
Helix 72
72
C
3226 3246Right-handed alpha
Helix 73
73
D
4002 4018Right-handed alpha
Helix 74
74
D
4042 4045Right-handed 310
Helix 75
75
D
4046 4064Right-handed alpha
Helix 76
76
D
4069 4073Right-handed 310
Helix 77
77
D
4096 4101Right-handed 310
Helix 78
78
D
4101 4104Right-handed 310
Helix 79
79
D
4105 4117Right-handed alpha
Helix 80
80
D
4123 4135Right-handed alpha
Helix 81
81
D
4139 4154Right-handed alpha
Helix 82
82
D
4168 4172Right-handed 310
Helix 83
83
D
4183 4188Right-handed alpha
Helix 84
84
D
4189 4190Right-handed 310
Helix 85
85
D
4191 4194Right-handed 310
Helix 86
86
D
4197 4202Right-handed alpha
Helix 87
87
D
4203 4215Right-handed alpha
Helix 88
88
D
4225 4232Right-handed alpha
Helix 89
89
D
4235 4253Right-handed alpha
Helix 90
90
D
4259 4270Right-handed alpha
Helix 91
91
D
4291 4295Right-handed 310
Helix 92
92
D
4296 4304Right-handed alpha
Helix 93
93
D
4305 4310Right-handed alpha
Helix 94
94
D
4312 4330Right-handed alpha
Helix 95
95
A
1002 4337Right-handed alpha
Helix 96
96
D
4343 4352Right-handed alpha
Helix 97
97
D
4354 4371Right-handed alpha
Helix 98
98
D
4386 4408Right-handed alpha
Helix 99
99
D
4408 4415Right-handed alpha
Helix 100
100
D
4417 4438Right-handed alpha
Helix 101
101
D
4439 4459Right-handed alpha
Helix 102
102
D
4473 4478Right-handed alpha
Helix 103
103
D
4495 4499Right-handed 310
Helix 104
104
D
4504 4518Right-handed alpha
Helix 105
105
D
4526 4533Right-handed alpha
Helix 106
106
D
4544 4554Right-handed alpha
Helix 107
107
D
4563 4567Right-handed 310
Helix 108
108
E
5022 5025Right-handed 310
Helix 109
109
E
5029 5041Right-handed alpha
Helix 110
110
E
5047 5057Right-handed alpha
Helix 111
111
E
5075 5077Right-handed 310
Helix 112
112
E
5078 5091Right-handed alpha
Helix 113
113
E
5104 5106Right-handed 310
Helix 114
114
E
5114 5120Right-handed alpha
Helix 115
115
E
5125 5143Right-handed alpha
Helix 116
116
E
5146 5148Right-handed 310
Helix 117
117
E
5149 5159Right-handed alpha
Helix 118
118
E
5178 5182Right-handed 310
Helix 119
119
E
5187 5191Right-handed 310
Helix 120
120
E
5193 5201Right-handed alpha
Helix 121
121
E
5204 5223Right-handed alpha
Helix 122
122
E
5228 5243Right-handed alpha
Helix 123
123
E
5247 5257Right-handed alpha
Helix 124
124
E
5261 5276Right-handed alpha
Helix 125
125
E
5296 5320Right-handed alpha
Helix 126
126
E
5321 5323Right-handed 310
Helix 127
127
E
5324 5341Right-handed alpha
Helix 128
128
E
5344 5347Right-handed 310
Helix 129
129
E
5348 5360Right-handed alpha
Helix 130
130
E
5369 5373Right-handed 310
Helix 131
131
E
5387 5397Right-handed alpha
Helix 132
132
E
5405 5411Right-handed alpha
Helix 133
133
E
5410 5418Right-handed alpha
Helix 134
134
E
5420 5425Right-handed alpha
Helix 135
135
E
5425 5431Right-handed alpha
Helix 136
136
F
6012 6024Right-handed alpha
Helix 137
137
F
6033 6042Right-handed alpha
Helix 138
138
F
6056 6061Right-handed alpha
Helix 139
139
F
6066 6071Right-handed alpha
Helix 140
140
F
6074 6080Right-handed alpha
Helix 141
141
F
6098 6110Right-handed alpha
Helix 142
142
F
6128 6141Right-handed alpha
Helix 143
143
F
6205 6213Right-handed alpha
Helix 144
144
F
6222 6225Right-handed 310
Helix 145
145
F
6226 6246Right-handed alpha
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There are 15 sheets in PDB entry 1E6Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1086 1087first strand
Strand 2
A
1094 1095anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1176 1181first strand
Strand 2
A
1218 1223anti-parallel
Strand 3
A
1118 1122anti-parallel
Strand 4
A
1274 1275anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2004 2008first strand
Strand 2
B
2014 2020anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2099 2103first strand
Strand 2
B
2108 2112anti-parallel
Strand 3
B
2042 2046anti-parallel
Strand 4
B
2172 2173anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2279 2284first strand
Strand 2
B
2290 2294anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3114 3117first strand
Strand 2
C
3122 3127anti-parallel
Strand 3
C
3083 3090anti-parallel
Strand 4
C
3149 3151anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3176 3179first strand
Strand 2
C
3182 3187anti-parallel
Strand 3
C
3193 3199anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4035 4036first strand
Strand 2
F
6163 6164parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4086 4087first strand
Strand 2
D
4094 4095anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4176 4181first strand
Strand 2
D
4218 4223anti-parallel
Strand 3
D
4118 4122anti-parallel
Strand 4
D
4274 4275anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5004 5008first strand
Strand 2
E
5014 5020anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5099 5103first strand
Strand 2
E
5108 5112anti-parallel
Strand 3
E
5042 5045anti-parallel
Strand 4
E
5172 5173anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5279 5284first strand
Strand 2
E
5290 5294anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
6114 6117first strand
Strand 2
F
6122 6127anti-parallel
Strand 3
F
6083 6090anti-parallel
Strand 4
F
6149 6151anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
6176 6179first strand
Strand 2
F
6182 6187anti-parallel
Strand 3
F
6193 6199anti-parallel
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