Analysis of interatomic Contacts of Structural Units in PDB entry:
1E79


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1E79 entry

There are 9 chains in PDB entry 1E79 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 19ALA 510
B
 ALA 19ALA 510
C
 ALA 19ALA 510
D
 THR 9GLU 475
E
 THR 9ALA 474
F
 THR 9ALA 474
G
 ALA 1LEU 272
H
 GLN 15LEU 145
I
 VAL 1VAL 47
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are145 helices in PDB entry 1E79. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
78 82Right-handed 310
Helix 2
2
A
100 104Right-handed 310
Helix 3
3
A
150 157Right-handed alpha
Helix 4
4
A
174 186Right-handed alpha
Helix 5
5
A
186 191Right-handed alpha
Helix 6
6
A
194 198Right-handed 310
Helix 7
7
A
209 223Right-handed alpha
Helix 8
8
A
225 227Right-handed 310
Helix 9
9
A
239 260Right-handed alpha
Helix 10
10
A
270 285Right-handed alpha
Helix 11
11
A
290 294Right-handed 310
Helix 12
12
A
297 307Right-handed alpha
Helix 13
13
A
313 317Right-handed 310
Helix 14
14
A
336 346Right-handed alpha
Helix 15
15
A
353 359Right-handed alpha
Helix 16
16
A
374 379Right-handed 310
Helix 17
17
A
380 401Right-handed alpha
Helix 18
18
A
402 404Right-handed 310
Helix 19
19
A
411 427Right-handed alpha
Helix 20
20
A
437 450Right-handed alpha
Helix 21
21
A
457 459Right-handed 310
Helix 22
22
A
460 476Right-handed alpha
Helix 23
23
A
476 486Right-handed alpha
Helix 24
24
A
490 509Right-handed alpha
Helix 25
25
B
78 82Right-handed 310
Helix 26
26
B
100 104Right-handed 310
Helix 27
27
B
150 157Right-handed alpha
Helix 28
28
B
174 186Right-handed alpha
Helix 29
29
B
186 191Right-handed alpha
Helix 30
30
B
209 222Right-handed alpha
Helix 31
31
B
225 227Right-handed 310
Helix 32
32
B
239 259Right-handed alpha
Helix 33
33
B
270 285Right-handed alpha
Helix 34
34
B
290 294Right-handed 310
Helix 35
35
B
297 307Right-handed alpha
Helix 36
36
B
313 317Right-handed 310
Helix 37
37
B
336 344Right-handed alpha
Helix 38
38
B
353 358Right-handed alpha
Helix 39
39
B
372 377Right-handed alpha
Helix 40
40
B
380 399Right-handed alpha
Helix 41
41
B
406 410Right-handed 310
Helix 42
42
B
413 428Right-handed alpha
Helix 43
43
B
437 450Right-handed alpha
Helix 44
44
B
457 459Right-handed 310
Helix 45
45
B
460 476Right-handed alpha
Helix 46
46
B
476 487Right-handed alpha
Helix 47
47
B
490 508Right-handed alpha
Helix 48
48
C
78 82Right-handed 310
Helix 49
49
C
100 104Right-handed 310
Helix 50
50
C
150 157Right-handed alpha
Helix 51
51
C
174 186Right-handed alpha
Helix 52
52
C
186 191Right-handed alpha
Helix 53
53
C
194 198Right-handed 310
Helix 54
54
C
209 223Right-handed alpha
Helix 55
55
C
225 227Right-handed 310
Helix 56
56
C
239 260Right-handed alpha
Helix 57
57
C
270 285Right-handed alpha
Helix 58
58
C
290 294Right-handed 310
Helix 59
59
C
297 307Right-handed alpha
Helix 60
60
C
313 317Right-handed 310
Helix 61
61
C
336 344Right-handed alpha
Helix 62
62
C
353 360Right-handed alpha
Helix 63
63
C
374 379Right-handed 310
Helix 64
64
C
380 388Right-handed alpha
Helix 65
65
C
389 405Right-handed alpha
Helix 66
66
C
411 428Right-handed alpha
Helix 67
67
C
437 450Right-handed alpha
Helix 68
68
C
457 459Right-handed 310
Helix 69
69
C
460 476Right-handed alpha
Helix 70
70
C
476 487Right-handed alpha
Helix 71
71
C
490 510Right-handed alpha
Helix 72
72
D
87 90Right-handed 310
Helix 73
73
D
122 126Right-handed 310
Helix 74
74
D
137 144Right-handed alpha
Helix 75
75
D
161 174Right-handed alpha
Helix 76
76
D
189 194Right-handed alpha
Helix 77
77
D
225 248Right-handed alpha
Helix 78
78
D
258 269Right-handed alpha
Helix 79
79
D
277 281Right-handed 310
Helix 80
80
D
284 294Right-handed alpha
Helix 81
81
D
313 316Right-handed 310
Helix 82
82
D
319 326Right-handed alpha
Helix 83
83
D
327 329Right-handed 310
Helix 84
84
D
336 341Right-handed alpha
Helix 85
85
D
359 364Right-handed alpha
Helix 86
86
D
364 392Right-handed alpha
Helix 87
87
D
399 414Right-handed alpha
Helix 88
88
D
418 420Right-handed 310
Helix 89
89
D
421 426Right-handed alpha
Helix 90
90
D
433 447Right-handed alpha
Helix 91
91
D
453 458Right-handed 310
Helix 92
92
D
462 475Right-handed alpha
Helix 93
93
E
87 91Right-handed 310
Helix 94
94
E
122 125Right-handed 310
Helix 95
95
E
137 144Right-handed alpha
Helix 96
96
E
161 178Right-handed alpha
Helix 97
97
E
189 204Right-handed alpha
Helix 98
98
E
225 248Right-handed alpha
Helix 99
99
E
257 272Right-handed alpha
Helix 100
100
E
277 281Right-handed 310
Helix 101
101
E
284 294Right-handed alpha
Helix 102
102
E
312 316Right-handed 310
Helix 103
103
E
319 327Right-handed alpha
Helix 104
104
E
336 341Right-handed alpha
Helix 105
105
E
359 364Right-handed alpha
Helix 106
106
E
364 390Right-handed alpha
Helix 107
107
E
392 396Right-handed 310
Helix 108
108
E
397 414Right-handed alpha
Helix 109
109
E
421 426Right-handed alpha
Helix 110
110
E
433 447Right-handed alpha
Helix 111
111
E
453 457Right-handed 310
Helix 112
112
E
463 472Right-handed alpha
Helix 113
113
F
87 90Right-handed 310
Helix 114
114
F
122 126Right-handed 310
Helix 115
115
F
137 144Right-handed alpha
Helix 116
116
F
161 173Right-handed alpha
Helix 117
117
F
189 203Right-handed alpha
Helix 118
118
F
225 246Right-handed alpha
Helix 119
119
F
258 270Right-handed alpha
Helix 120
120
F
277 281Right-handed 310
Helix 121
121
F
284 294Right-handed alpha
Helix 122
122
F
313 316Right-handed 310
Helix 123
123
F
319 326Right-handed alpha
Helix 124
124
F
327 329Right-handed 310
Helix 125
125
F
336 342Right-handed alpha
Helix 126
126
F
359 364Right-handed alpha
Helix 127
127
F
364 389Right-handed alpha
Helix 128
128
F
392 396Right-handed 310
Helix 129
129
F
399 414Right-handed alpha
Helix 130
130
F
418 420Right-handed 310
Helix 131
131
F
421 426Right-handed alpha
Helix 132
132
F
433 447Right-handed alpha
Helix 133
133
F
453 458Right-handed 310
Helix 134
134
F
462 472Right-handed alpha
Helix 135
135
G
2 49Right-handed alpha
Helix 136
136
G
80 96Right-handed alpha
Helix 137
137
G
109 116Right-handed alpha
Helix 138
138
G
117 121Right-handed 310
Helix 139
139
G
137 150Right-handed alpha
Helix 140
140
G
187 192Right-handed 310
Helix 141
141
G
199 272Right-handed alpha
Helix 142
142
H
99 103Right-handed 310
Helix 143
143
H
104 120Right-handed alpha
Helix 144
144
H
124 143Right-handed alpha
Helix 145
145
I
10 25Right-handed alpha
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There are 24 sheets in PDB entry 1E79. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
87 90anti-parallel
Strand 3
A
52 55anti-parallel
Strand 4
A
60 67anti-parallel
Strand 5
A
70 76anti-parallel
Strand 6
A
38 43anti-parallel
Strand 7
A
29 35anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 99first strand
Strand 2
A
125 128anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 109first strand
Strand 2
A
229 234parallel
Strand 3
A
200 206parallel
Strand 4
A
263 269parallel
Strand 5
A
320 325parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 351first strand
Strand 2
A
165 170parallel
Strand 3
A
326 329parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 35first strand
Strand 2
B
38 41anti-parallel
Strand 3
B
70 75anti-parallel
Strand 4
B
60 67anti-parallel
Strand 5
B
52 55anti-parallel
Strand 6
B
88 90anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 99first strand
Strand 2
B
125 128anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 352first strand
Strand 2
B
166 169parallel
Strand 3
B
326 328parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
229 234first strand
Strand 2
B
200 206parallel
Strand 3
B
263 269parallel
Strand 4
B
320 325parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
28 30first strand
Strand 2
C
87 90anti-parallel
Strand 3
C
52 55anti-parallel
Strand 4
C
60 66anti-parallel
Strand 5
C
71 75anti-parallel
Strand 6
C
38 43anti-parallel
Strand 7
C
29 35anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
96 98first strand
Strand 2
C
126 128anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
349 352first strand
Strand 2
C
166 170parallel
Strand 3
C
326 329parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 234first strand
Strand 2
C
200 206parallel
Strand 3
C
263 269parallel
Strand 4
C
320 325parallel
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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
74 77anti-parallel
Strand 3
D
35 38anti-parallel
Strand 4
D
46 52anti-parallel
Strand 5
D
57 62anti-parallel
Strand 6
D
20 25anti-parallel
Strand 7
D
11 17anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
83 86first strand
Strand 2
D
112 115anti-parallel
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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
331 334first strand
Strand 2
D
151 156parallel
Strand 3
D
304 311parallel
Strand 4
D
251 256parallel
Strand 5
D
180 186parallel
Strand 6
D
215 220parallel
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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
10 12first strand
Strand 2
E
74 77anti-parallel
Strand 3
E
35 38anti-parallel
Strand 4
E
45 52anti-parallel
Strand 5
E
57 62anti-parallel
Strand 6
E
20 24anti-parallel
Strand 7
E
12 17anti-parallel
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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
83 86first strand
Strand 2
E
112 115anti-parallel
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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
331 334first strand
Strand 2
E
151 155parallel
Strand 3
E
303 309parallel
Strand 4
E
250 256parallel
Strand 5
E
181 188parallel
Strand 6
E
215 221parallel
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There are 7 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
10 12first strand
Strand 2
F
74 77anti-parallel
Strand 3
F
35 38anti-parallel
Strand 4
F
46 52anti-parallel
Strand 5
F
57 62anti-parallel
Strand 6
F
20 24anti-parallel
Strand 7
F
12 17anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
83 86first strand
Strand 2
F
112 115anti-parallel
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There are 6 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
331 334first strand
Strand 2
F
151 156parallel
Strand 3
F
303 311parallel
Strand 4
F
250 256parallel
Strand 5
F
180 186parallel
Strand 6
F
215 220parallel
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There are 5 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
170 178first strand
Strand 2
G
158 167anti-parallel
Strand 3
G
68 71parallel
Strand 4
G
105 108parallel
Strand 5
G
126 128parallel
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There are 5 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
31 33first strand
Strand 2
H
16 22anti-parallel
Strand 3
H
89 94parallel
Strand 4
H
80 84anti-parallel
Strand 5
H
54 57anti-parallel
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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
43 48first strand
Strand 2
H
35 40anti-parallel
Strand 3
H
61 66anti-parallel
Strand 4
H
73 77anti-parallel
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