Analysis of interatomic Contacts of Structural Units in PDB entry:
1E7R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1E7R entry

There is 1 chain in PDB entry 1E7R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3GLN 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1E7R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 24Right-handed alpha
Helix 2
2
A
43 55Right-handed alpha
Helix 3
3
A
68 75Right-handed alpha
Helix 4
4
A
75 97Right-handed alpha
Helix 5
5
A
107 111Right-handed 310
Helix 6
6
A
120 124Right-handed 310
Helix 7
7
A
130 132Right-handed 310
Helix 8
8
A
133 155Right-handed alpha
Helix 9
9
A
179 195Right-handed alpha
Helix 10
10
A
214 227Right-handed alpha
Helix 11
11
A
228 235Right-handed alpha
Helix 12
12
A
253 265Right-handed alpha
Helix 13
13
A
287 293Right-handed alpha
Helix 14
14
A
300 315Right-handed alpha
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There are 4 sheets in PDB entry 1E7R. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
4 9parallel
Strand 3
A
58 61parallel
Strand 4
A
101 105parallel
Strand 5
A
157 163parallel
Strand 6
A
243 245parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 167first strand
Strand 2
A
211 213parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 202first strand
Strand 2
A
269 273parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 209first strand
Strand 2
A
251 252anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il