Analysis of interatomic Contacts of Structural Units in PDB entry:
1E96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1E96 entry

There are 2 chains in PDB entry 1E96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1CYS 178
B
 SER 2ASN 186
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1E96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 26Right-handed alpha
Helix 2
2
A
61 65Right-handed 310
Helix 3
3
A
67 72Right-handed 310
Helix 4
4
A
86 96Right-handed alpha
Helix 5
5
A
96 105Right-handed alpha
Helix 6
6
A
116 121Right-handed 310
Helix 7
7
A
122 132Right-handed alpha
Helix 8
8
A
138 149Right-handed alpha
Helix 9
9
A
164 178Right-handed alpha
Helix 10
10
B
2 19Right-handed alpha
Helix 11
11
B
21 31Right-handed alpha
Helix 12
12
B
36 50Right-handed alpha
Helix 13
13
B
52 67Right-handed alpha
Helix 14
14
B
70 84Right-handed alpha
Helix 15
15
B
86 100Right-handed alpha
Helix 16
16
B
110 113Right-handed 310
Helix 17
17
B
120 134Right-handed alpha
Helix 18
18
B
136 150Right-handed alpha
Helix 19
19
B
153 156Right-handed 310
Helix 20
20
B
157 167Right-handed alpha
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There are 2 sheets in PDB entry 1E96. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 156first strand
Strand 2
A
109 115parallel
Strand 3
A
77 83parallel
Strand 4
A
2 10parallel
Strand 5
A
49 58parallel
Strand 6
A
37 46anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 108first strand
Strand 2
B
117 119anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il