Analysis of interatomic Contacts of Structural Units in PDB entry:
1EB3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EB3 entry

There is 1 chain in PDB entry 1EB3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 340
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1EB3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 17Right-handed 310
Helix 2
2
A
18 22Right-handed 310
Helix 3
3
A
24 31Right-handed alpha
Helix 4
4
A
37 39Right-handed 310
Helix 5
5
A
67 81Right-handed alpha
Helix 6
6
A
102 107Right-handed 310
Helix 7
7
A
110 123Right-handed alpha
Helix 8
8
A
153 172Right-handed alpha
Helix 9
9
A
184 196Right-handed alpha
Helix 10
10
A
216 224Right-handed alpha
Helix 11
11
A
241 255Right-handed alpha
Helix 12
12
A
265 267Right-handed 310
Helix 13
13
A
268 279Right-handed alpha
Helix 14
14
A
289 302Right-handed alpha
Helix 15
15
A
306 322Right-handed alpha
Helix 16
16
A
330 338Right-handed alpha
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There is 1 sheet ( AA) in PDB entry 1EB3.

There are 11 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 48first strand
Strand 2
A
325 328parallel
Strand 3
A
284 288parallel
Strand 4
A
259 263parallel
Strand 5
A
203 210parallel
Strand 6
A
175 178parallel
Strand 7
A
127 132parallel
Strand 8
A
85 91parallel
Strand 9
A
41 48parallel
Strand 10
A
325 328parallel
Strand 11
A
41 48parallel
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