Analysis of interatomic Contacts of Structural Units in PDB entry:
1EB7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EB7 entry

There is 1 chain in PDB entry 1EB7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1GLU 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1EB7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 11Right-handed alpha
Helix 2
2
A
27 40Right-handed alpha
Helix 3
3
A
41 44Right-handed 310
Helix 4
4
A
50 55Right-handed alpha
Helix 5
5
A
85 89Right-handed 310
Helix 6
6
A
99 103Right-handed 310
Helix 7
7
A
107 117Right-handed alpha
Helix 8
8
A
118 128Right-handed alpha
Helix 9
9
A
129 140Right-handed alpha
Helix 10
10
A
148 163Right-handed alpha
Helix 11
11
A
168 175Right-handed alpha
Helix 12
12
A
182 195Right-handed alpha
Helix 13
13
A
196 200Right-handed 310
Helix 14
14
A
252 256Right-handed 310
Helix 15
15
A
267 276Right-handed alpha
Helix 16
16
A
285 298Right-handed alpha
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There are 3 sheets in PDB entry 1EB7. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 21first strand
Strand 2
A
24 25anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 97first strand
Strand 2
A
243 246anti-parallel
Strand 3
A
211 212anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 218first strand
Strand 2
A
233 237anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il