Analysis of interatomic Contacts of Structural Units in PDB entry:
1EBB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EBB entry

There is 1 chain in PDB entry 1EBB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLU 203
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1EBB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 18Right-handed alpha
Helix 2
2
A
30 44Right-handed alpha
Helix 3
3
A
57 69Right-handed alpha
Helix 4
4
A
79 82Right-handed 310
Helix 5
5
A
86 90Right-handed 310
Helix 6
6
A
93 99Right-handed alpha
Helix 7
7
A
101 111Right-handed alpha
Helix 8
8
A
112 115Right-handed 310
Helix 9
9
A
122 140Right-handed alpha
Helix 10
10
A
151 164Right-handed alpha
Helix 11
11
A
166 170Right-handed 310
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There is 1 sheet ( AA) in PDB entry 1EBB.

There are 6 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 77first strand
Strand 2
A
51 54parallel
Strand 3
A
145 150parallel
Strand 4
A
3 9parallel
Strand 5
A
181 187anti-parallel
Strand 6
A
190 198anti-parallel
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