Analysis of interatomic Contacts of Structural Units in PDB entry:
1EDO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EDO entry

There is 1 chain in PDB entry 1EDO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 17ILE 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 1EDO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
27 40Right-handed alpha
Helix 2
2
A
51 66Right-handed alpha
Helix 3
3
A
78 93Right-handed alpha
Helix 4
4
A
110 114Right-handed 310
Helix 5
5
A
115 127Right-handed alpha
Helix 6
7
A
155 160Right-handed alpha
Helix 7
8
A
164 187Right-handed alpha
Helix 8
9
A
202 207Right-handed alpha
Helix 9
10
A
209 218Right-handed alpha
Helix 10
11
A
227 241Right-handed alpha
Helix 11
12
A
242 247Right-handed 310
Back to top of page

There is 1 sheet ( A) in PDB entry 1EDO.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
43 48parallel
Strand 3
A
19 22parallel
Strand 4
A
98 101parallel
Strand 5
A
147 152parallel
Strand 6
A
190 197parallel
Strand 7
A
251 254parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il