Analysis of interatomic Contacts of Structural Units in PDB entry:
1EDZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EDZ entry

There is 1 chain in PDB entry 1EDZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3GLU 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1EDZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 15Right-handed alpha
Helix 2
2
A
17 31Right-handed alpha
Helix 3
3
A
47 63Right-handed alpha
Helix 4
4
A
76 88Right-handed alpha
Helix 5
5
A
104 113Right-handed alpha
Helix 6
6
A
125 133Right-handed alpha
Helix 7
7
A
149 162Right-handed alpha
Helix 8
8
A
189 199Right-handed alpha
Helix 9
9
A
236 245Right-handed alpha
Helix 10
10
A
296 317Right-handed alpha
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There are 2 sheets in PDB entry 1EDZ. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
288 292parallel
Strand 3
A
270 274parallel
Strand 4
A
247 251parallel
Strand 5
A
179 183parallel
Strand 6
A
203 207parallel
Strand 7
A
212 216anti-parallel
Strand 8
A
227 232anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 73first strand
Strand 2
A
37 43parallel
Strand 3
A
94 98parallel
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