Analysis of interatomic Contacts of Structural Units in PDB entry:
1EF6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EF6 entry

There are 2 chains in PDB entry 1EF6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 281THR 301
B
 ARG 430GLN 614
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1EF6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
285 299Right-handed alpha
Helix 2
3
B
432 457Right-handed alpha
Helix 3
4
B
464 475Right-handed alpha
Helix 4
5
B
476 487Right-handed alpha
Helix 5
6
B
505 511Right-handed 310
Helix 6
7
B
516 530Right-handed alpha
Helix 7
8
B
533 544Right-handed alpha
Helix 8
9
B
557 578Right-handed alpha
Helix 9
10
B
583 601Right-handed alpha
Helix 10
11
B
602 613Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1EF6.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
488 489first strand
Strand 2
B
494 495anti-parallel
Strand 3
B
503 504anti-parallel
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