Analysis of interatomic Contacts of Structural Units in PDB entry:
1EGG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EGG entry

There are 2 chains in PDB entry 1EGG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 628LYS 763
B
 ILE 625LYS 768
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 1EGG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
648 652Right-handed 310
Helix 2
2
A
654 664Right-handed alpha
Helix 3
3
A
674 689Right-handed alpha
Helix 4
4
A
727 731Right-handed 310
Helix 5
5
B
648 652Right-handed 310
Helix 6
6
B
654 666Right-handed alpha
Helix 7
7
B
674 688Right-handed alpha
Helix 8
8
B
727 731Right-handed 310
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There are 4 sheets in PDB entry 1EGG. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
746 750first strand
Strand 2
A
734 739anti-parallel
Strand 3
A
694 700anti-parallel
Strand 4
A
756 760parallel
Strand 5
A
641 645anti-parallel
Strand 6
A
633 634anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
746 750first strand
Strand 2
A
734 739anti-parallel
Strand 3
A
694 700anti-parallel
Strand 4
A
756 760parallel
Strand 5
A
668 669anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
746 750first strand
Strand 2
B
734 739anti-parallel
Strand 3
B
694 700anti-parallel
Strand 4
B
756 762parallel
Strand 5
B
640 645anti-parallel
Strand 6
B
633 634anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
746 750first strand
Strand 2
B
734 739anti-parallel
Strand 3
B
694 700anti-parallel
Strand 4
B
756 762parallel
Strand 5
B
668 669anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il