Analysis of interatomic Contacts of Structural Units in PDB entry:
1EH9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EH9 entry

There is 1 chain in PDB entry 1EH9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1LYS 557
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 1EH9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
117 124Right-handed alpha
Helix 2
2
A
124 132Right-handed alpha
Helix 3
3
A
166 180Right-handed alpha
Helix 4
4
A
199 204Right-handed alpha
Helix 5
5
A
225 244Right-handed alpha
Helix 6
6
A
253 257Right-handed 310
Helix 7
7
A
264 276Right-handed alpha
Helix 8
8
A
294 298Right-handed 310
Helix 9
9
A
307 319Right-handed alpha
Helix 10
10
A
323 329Right-handed 310
Helix 11
11
A
331 341Right-handed alpha
Helix 12
12
A
365 367Right-handed 310
Helix 13
13
A
375 381Right-handed alpha
Helix 14
14
A
387 392Right-handed 310
Helix 15
15
A
393 406Right-handed alpha
Helix 16
16
A
416 420Right-handed 310
Helix 17
17
A
435 448Right-handed alpha
Helix 18
18
A
456 462Right-handed alpha
Helix 19
19
A
470 488Right-handed alpha
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There are 8 sheets in PDB entry 1EH9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 12first strand
Strand 2
A
46 47anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
42 43anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
82 83anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
65 66anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
369 370first strand
Strand 2
A
304 306parallel
Strand 3
A
280 282parallel
Strand 4
A
249 251parallel
Strand 5
A
183 188parallel
Strand 6
A
135 138parallel
Strand 7
A
104 107parallel
Strand 8
A
412 414parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 350first strand
Strand 2
A
355 357anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
496 497first strand
Strand 2
A
503 507anti-parallel
Strand 3
A
513 516anti-parallel
Strand 4
A
552 555anti-parallel
Strand 5
A
532 533anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 522first strand
Strand 2
A
547 549anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il