Analysis of interatomic Contacts of Structural Units in PDB entry:
1EJI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EJI entry

There are 4 chains in PDB entry 1EJI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 7PHE 484
B
 MET 7PHE 484
C
 MET 7PHE 484
D
 MET 7PHE 484
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 98 helices in PDB entry 1EJI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 22Right-handed alpha
Helix 2
2
A
25 30Right-handed alpha
Helix 3
3
A
30 46Right-handed alpha
Helix 4
4
A
58 66Right-handed alpha
Helix 5
5
A
67 72Right-handed 310
Helix 6
6
A
86 104Right-handed alpha
Helix 7
7
A
119 132Right-handed alpha
Helix 8
8
A
143 146Right-handed 310
Helix 9
9
A
148 152Right-handed 310
Helix 10
10
A
161 167Right-handed alpha
Helix 11
11
A
182 194Right-handed alpha
Helix 12
12
A
210 221Right-handed alpha
Helix 13
13
A
232 238Right-handed alpha
Helix 14
14
A
243 247Right-handed 310
Helix 15
15
A
256 260Right-handed 310
Helix 16
16
A
287 297Right-handed alpha
Helix 17
17
A
305 320Right-handed alpha
Helix 18
18
A
321 345Right-handed alpha
Helix 19
19
A
364 367Right-handed 310
Helix 20
20
A
369 380Right-handed alpha
Helix 21
21
A
405 410Right-handed alpha
Helix 22
22
A
414 438Right-handed alpha
Helix 23
23
A
444 454Right-handed alpha
Helix 24
24
A
458 474Right-handed alpha
Helix 25
25
B
8 13Right-handed alpha
Helix 26
26
B
13 22Right-handed alpha
Helix 27
27
B
25 30Right-handed alpha
Helix 28
28
B
30 46Right-handed alpha
Helix 29
29
B
58 66Right-handed alpha
Helix 30
30
B
67 72Right-handed 310
Helix 31
31
B
86 104Right-handed alpha
Helix 32
32
B
119 132Right-handed alpha
Helix 33
33
B
143 146Right-handed 310
Helix 34
34
B
148 152Right-handed 310
Helix 35
35
B
161 167Right-handed alpha
Helix 36
36
B
182 194Right-handed alpha
Helix 37
37
B
210 221Right-handed alpha
Helix 38
38
B
232 238Right-handed alpha
Helix 39
39
B
243 247Right-handed 310
Helix 40
40
B
256 260Right-handed 310
Helix 41
41
B
287 297Right-handed alpha
Helix 42
42
B
305 320Right-handed alpha
Helix 43
43
B
321 345Right-handed alpha
Helix 44
44
B
364 367Right-handed 310
Helix 45
45
B
369 380Right-handed alpha
Helix 46
46
B
405 410Right-handed alpha
Helix 47
47
B
414 438Right-handed alpha
Helix 48
48
B
444 453Right-handed alpha
Helix 49
49
B
458 474Right-handed alpha
Helix 50
50
C
8 13Right-handed alpha
Helix 51
51
C
14 22Right-handed alpha
Helix 52
52
C
25 30Right-handed alpha
Helix 53
53
C
30 46Right-handed alpha
Helix 54
54
C
58 66Right-handed alpha
Helix 55
55
C
67 72Right-handed 310
Helix 56
56
C
86 104Right-handed alpha
Helix 57
57
C
119 132Right-handed alpha
Helix 58
58
C
143 146Right-handed 310
Helix 59
59
C
148 152Right-handed 310
Helix 60
60
C
161 167Right-handed alpha
Helix 61
61
C
182 194Right-handed alpha
Helix 62
62
C
210 221Right-handed alpha
Helix 63
63
C
232 238Right-handed alpha
Helix 64
64
C
243 247Right-handed 310
Helix 65
65
C
256 260Right-handed 310
Helix 66
66
C
287 297Right-handed alpha
Helix 67
67
C
305 320Right-handed alpha
Helix 68
68
C
321 345Right-handed alpha
Helix 69
69
C
364 367Right-handed 310
Helix 70
70
C
369 380Right-handed alpha
Helix 71
71
C
405 410Right-handed alpha
Helix 72
72
C
414 437Right-handed alpha
Helix 73
73
C
444 454Right-handed alpha
Helix 74
74
C
456 474Right-handed alpha
Helix 75
75
D
13 22Right-handed alpha
Helix 76
76
D
25 30Right-handed alpha
Helix 77
77
D
30 46Right-handed alpha
Helix 78
78
D
58 66Right-handed alpha
Helix 79
79
D
67 72Right-handed 310
Helix 80
80
D
86 104Right-handed alpha
Helix 81
81
D
119 132Right-handed alpha
Helix 82
82
D
143 146Right-handed 310
Helix 83
83
D
148 152Right-handed 310
Helix 84
84
D
161 167Right-handed alpha
Helix 85
85
D
182 194Right-handed alpha
Helix 86
86
D
210 221Right-handed alpha
Helix 87
87
D
232 238Right-handed alpha
Helix 88
88
D
243 247Right-handed 310
Helix 89
89
D
256 260Right-handed 310
Helix 90
90
D
287 297Right-handed alpha
Helix 91
91
D
305 320Right-handed alpha
Helix 92
92
D
321 345Right-handed alpha
Helix 93
93
D
364 367Right-handed 310
Helix 94
94
D
369 380Right-handed alpha
Helix 95
95
D
405 410Right-handed alpha
Helix 96
96
D
414 438Right-handed alpha
Helix 97
97
D
444 452Right-handed alpha
Helix 98
98
D
458 474Right-handed alpha
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There are 13 sheets in PDB entry 1EJI. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
382 383parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
265 270anti-parallel
Strand 3
A
250 254anti-parallel
Strand 4
A
224 228parallel
Strand 5
A
197 200parallel
Strand 6
A
137 141parallel
Strand 7
A
168 172parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
283 284anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
358 362first strand
Strand 2
A
400 404anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
382 383parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 114first strand
Strand 2
B
265 270anti-parallel
Strand 3
B
250 254anti-parallel
Strand 4
B
224 228parallel
Strand 5
B
197 200parallel
Strand 6
B
137 141parallel
Strand 7
B
168 172parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
358 362first strand
Strand 2
B
400 404anti-parallel
Strand 3
B
386 387anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 49first strand
Strand 2
C
382 383parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
111 114first strand
Strand 2
C
265 270anti-parallel
Strand 3
C
250 254anti-parallel
Strand 4
C
224 228parallel
Strand 5
C
197 200parallel
Strand 6
C
137 141parallel
Strand 7
C
168 172parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
358 362first strand
Strand 2
C
400 404anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
111 114first strand
Strand 2
D
265 270anti-parallel
Strand 3
D
250 254anti-parallel
Strand 4
D
224 228parallel
Strand 5
D
197 200parallel
Strand 6
D
137 141parallel
Strand 7
D
168 172parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
275 276first strand
Strand 2
D
283 284anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
358 362first strand
Strand 2
D
400 404anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il