Analysis of interatomic Contacts of Structural Units in PDB entry:
1ESN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ESN entry

There are 4 chains in PDB entry 1ESN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 6LYS 316
B
LEU 8LYS 316
C
LEU 8LYS 316
D
LEU 8LYS 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 1ESN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
17 23Right-handed alpha
Helix 2
2
A
32 43Right-handed alpha
Helix 3
3
A
47 54Right-handed alpha
Helix 4
4
A
54 80Right-handed alpha
Helix 5
5
A
100 114Right-handed alpha
Helix 6
6
A
127 129Right-handed 310
Helix 7
7
A
132 139Right-handed alpha
Helix 8
8
A
147 150Right-handed 310
Helix 9
9
A
152 164Right-handed alpha
Helix 10
10
A
206 210Right-handed 310
Helix 11
11
A
218 223Right-handed 310
Helix 12
12
A
232 248Right-handed alpha
Helix 13
13
A
249 251Right-handed 310
Helix 14
14
A
259 263Right-handed 310
Helix 15
15
A
266 281Right-handed alpha
Helix 16
16
A
281 290Right-handed alpha
Helix 17
17
A
291 297Right-handed 310
Helix 18
18
B
17 21Right-handed alpha
Helix 19
19
B
32 43Right-handed alpha
Helix 20
20
B
47 54Right-handed alpha
Helix 21
21
B
54 81Right-handed alpha
Helix 22
22
B
100 113Right-handed alpha
Helix 23
23
B
127 129Right-handed 310
Helix 24
24
B
132 139Right-handed alpha
Helix 25
25
B
147 150Right-handed 310
Helix 26
26
B
152 164Right-handed alpha
Helix 27
27
B
206 210Right-handed 310
Helix 28
28
B
218 223Right-handed 310
Helix 29
29
B
232 248Right-handed alpha
Helix 30
30
B
249 251Right-handed 310
Helix 31
31
B
259 264Right-handed 310
Helix 32
32
B
266 281Right-handed alpha
Helix 33
33
B
281 290Right-handed alpha
Helix 34
34
B
291 297Right-handed 310
Helix 35
35
C
17 21Right-handed alpha
Helix 36
36
C
35 43Right-handed alpha
Helix 37
37
C
47 54Right-handed alpha
Helix 38
38
C
54 81Right-handed alpha
Helix 39
39
C
100 113Right-handed alpha
Helix 40
40
C
127 129Right-handed 310
Helix 41
41
C
132 139Right-handed alpha
Helix 42
42
C
147 150Right-handed 310
Helix 43
43
C
152 164Right-handed alpha
Helix 44
44
C
206 210Right-handed 310
Helix 45
45
C
218 223Right-handed 310
Helix 46
46
C
232 248Right-handed alpha
Helix 47
47
C
259 264Right-handed 310
Helix 48
48
C
266 281Right-handed alpha
Helix 49
49
C
281 290Right-handed alpha
Helix 50
50
C
291 297Right-handed 310
Helix 51
51
D
17 21Right-handed alpha
Helix 52
52
D
32 43Right-handed alpha
Helix 53
53
D
47 54Right-handed alpha
Helix 54
54
D
54 81Right-handed alpha
Helix 55
55
D
100 113Right-handed alpha
Helix 56
56
D
127 129Right-handed 310
Helix 57
57
D
132 139Right-handed alpha
Helix 58
58
D
147 150Right-handed 310
Helix 59
59
D
152 164Right-handed alpha
Helix 60
60
D
206 210Right-handed 310
Helix 61
61
D
218 223Right-handed 310
Helix 62
62
D
232 249Right-handed alpha
Helix 63
63
D
259 263Right-handed 310
Helix 64
64
D
266 281Right-handed alpha
Helix 65
65
D
281 290Right-handed alpha
Helix 66
66
D
291 297Right-handed 310
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There are 12 sheets in PDB entry 1ESN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
12 16first strand
Strand 2
A
309 315anti-parallel
Strand 3
A
299 303anti-parallel
Strand 4
A
225 230parallel
Strand 5
A
89 95parallel
Strand 6
A
195 199parallel
Strand 7
A
121 125parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
169 172first strand
Strand 2
A
188 191anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
175 176first strand
Strand 2
A
181 182anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
12 16first strand
Strand 2
B
309 315anti-parallel
Strand 3
B
299 303anti-parallel
Strand 4
B
225 230parallel
Strand 5
B
89 95parallel
Strand 6
B
195 199parallel
Strand 7
B
121 125parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
169 172first strand
Strand 2
B
188 191anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
175 176first strand
Strand 2
B
181 182anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
12 16first strand
Strand 2
C
309 315anti-parallel
Strand 3
C
299 303anti-parallel
Strand 4
C
225 230parallel
Strand 5
C
89 95parallel
Strand 6
C
195 199parallel
Strand 7
C
121 125parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
169 172first strand
Strand 2
C
188 191anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
175 176first strand
Strand 2
C
181 182anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
12 16first strand
Strand 2
D
309 315anti-parallel
Strand 3
D
299 303anti-parallel
Strand 4
D
225 230parallel
Strand 5
D
89 95parallel
Strand 6
D
195 199parallel
Strand 7
D
121 125parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
169 172first strand
Strand 2
D
188 191anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
175 176first strand
Strand 2
D
181 182anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il