Analysis of interatomic Contacts of Structural Units in PDB entry:
1ETP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1ETP entry

There are 2 chains in PDB entry 1ETP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 1HIS 190
B
ALA 1HIS 190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1ETP. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AAN
A
3 8Right-handed alpha
Helix 2
BAN
A
11 18Right-handed alpha
Helix 3
CAN
A
36 51Right-handed alpha
Helix 4
EAN
A
74 87Right-handed alpha
Helix 5
AAC
A
99 110Right-handed alpha
Helix 6
BAC
A
119 123Right-handed alpha
Helix 7
CAC
A
142 156Right-handed alpha
Helix 8
DAC
A
165 172Right-handed alpha
Helix 9
EAC
A
175 187Right-handed alpha
Helix 10
ABN
B
3 8Right-handed alpha
Helix 11
BBN
B
11 18Right-handed alpha
Helix 12
CBN
B
36 51Right-handed alpha
Helix 13
EBN
B
74 87Right-handed alpha
Helix 14
ABC
B
99 110Right-handed alpha
Helix 15
BBC
B
119 123Right-handed alpha
Helix 16
CBC
B
142 156Right-handed alpha
Helix 17
DBC
B
165 172Right-handed alpha
Helix 18
EBC
B
175 187Right-handed alpha
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There are no sheets in PDB entry 1ETP

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il