Analysis of interatomic Contacts of Structural Units in PDB entry:
1EV1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EV1 entry

There are 4 chains in PDB entry 1EV1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 GLY 1THR 281
2
 GLY 8GLN 261
3
 GLY 1GLN 239
4
 GLY 2ASN 69
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1EV1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
1
34 36Right-handed 310
Helix 2
2
1
44 46Right-handed 310
Helix 3
3
1
64 68Right-handed alpha
Helix 4
4
1
87 89Right-handed 310
Helix 5
5
1
97 99Right-handed 310
Helix 6
6
1
102 109Right-handed alpha
Helix 7
7
1
160 163Right-handed 310
Helix 8
8
1
210 212Right-handed 310
Helix 9
9
2
34 36Right-handed 310
Helix 10
10
2
57 59Right-handed 310
Helix 11
11
2
84 88Right-handed 310
Helix 12
12
2
90 98Right-handed alpha
Helix 13
13
2
143 145Right-handed 310
Helix 14
14
2
170 172Right-handed 310
Helix 15
15
2
179 184Right-handed 310
Helix 16
16
3
43 47Right-handed 310
Helix 17
17
3
60 63Right-handed alpha
Helix 18
18
3
67 69Right-handed 310
Helix 19
19
3
94 97Right-handed alpha
Helix 20
20
3
100 107Right-handed alpha
Helix 21
21
3
146 151Right-handed alpha
Helix 22
22
3
184 186Right-handed 310
Helix 23
23
4
36 38Right-handed 310
Helix 24
24
4
50 54Right-handed 310
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There are 12 sheets in PDB entry 1EV1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
90 94first strand
Strand 2
1
218 223anti-parallel
Strand 3
1
141 147anti-parallel
Strand 4
1
169 173anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
112 114first strand
Strand 2
1
246 248anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
179 183first strand
Strand 2
1
116 127anti-parallel
Strand 3
1
232 243anti-parallel
Strand 4
1
72 80anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
14 17first strand
Strand 2
2
22 25anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
63 65first strand
Strand 2
2
242 248anti-parallel
Strand 3
2
105 111anti-parallel
Strand 4
2
197 202anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
69 71first strand
Strand 2
2
239 241anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
78 82first strand
Strand 2
2
219 227anti-parallel
Strand 3
2
121 128anti-parallel
Strand 4
2
187 191anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
101 103first strand
Strand 2
2
251 253anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
70 74first strand
Strand 2
3
208 217anti-parallel
Strand 3
3
115 122anti-parallel
Strand 4
3
164 169anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
110 112first strand
Strand 2
3
222 224anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
153 158first strand
Strand 2
3
130 136anti-parallel
Strand 3
3
190 195anti-parallel
Strand 4
3
82 87anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
4 7first strand
Strand 2
4
26 29anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il