Analysis of interatomic Contacts of Structural Units in PDB entry:
1EV7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EV7 entry

There are 2 chains in PDB entry 1EV7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 10VAL 311
B
 GLU 10VAL 311
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 1EV7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 26Right-handed alpha
Helix 2
2
A
29 45Right-handed alpha
Helix 3
3
A
45 50Right-handed alpha
Helix 4
4
A
53 57Right-handed 310
Helix 5
5
A
58 64Right-handed alpha
Helix 6
6
A
64 78Right-handed alpha
Helix 7
7
A
108 112Right-handed 310
Helix 8
8
A
136 139Right-handed 310
Helix 9
9
A
152 157Right-handed alpha
Helix 10
10
A
172 176Right-handed 310
Helix 11
11
A
178 187Right-handed alpha
Helix 12
12
A
195 208Right-handed alpha
Helix 13
13
A
214 223Right-handed alpha
Helix 14
14
A
227 231Right-handed 310
Helix 15
15
A
241 244Right-handed 310
Helix 16
16
B
10 26Right-handed alpha
Helix 17
17
B
29 45Right-handed alpha
Helix 18
18
B
45 50Right-handed alpha
Helix 19
19
B
53 57Right-handed 310
Helix 20
20
B
58 78Right-handed alpha
Helix 21
21
B
108 112Right-handed 310
Helix 22
22
B
136 139Right-handed 310
Helix 23
23
B
152 157Right-handed alpha
Helix 24
24
B
173 177Right-handed 310
Helix 25
25
B
178 188Right-handed alpha
Helix 26
26
B
195 208Right-handed alpha
Helix 27
27
B
215 223Right-handed alpha
Helix 28
28
B
226 231Right-handed 310
Helix 29
29
B
236 241Right-handed alpha
Helix 30
30
B
242 244Right-handed 310
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There are 7 sheets in PDB entry 1EV7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 81first strand
Strand 2
A
87 89anti-parallel
Strand 3
A
92 99anti-parallel
Strand 4
A
115 122parallel
Strand 5
A
127 134anti-parallel
Strand 6
A
160 161anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 249first strand
Strand 2
A
272 279anti-parallel
Strand 3
A
212 213anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 249first strand
Strand 2
A
272 279anti-parallel
Strand 3
A
295 298anti-parallel
Strand 4
A
288 290anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 81first strand
Strand 2
B
87 89anti-parallel
Strand 3
B
92 99anti-parallel
Strand 4
B
115 122parallel
Strand 5
B
127 134anti-parallel
Strand 6
B
160 161anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
149 150anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 249first strand
Strand 2
B
271 279anti-parallel
Strand 3
B
213 214anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 249first strand
Strand 2
B
271 279anti-parallel
Strand 3
B
295 298anti-parallel
Strand 4
B
289 290anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il