Analysis of interatomic Contacts of Structural Units in PDB entry:
1EV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EV9 entry

There are 3 chains in PDB entry 1EV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2PHE 220
C
SER 2MET 208
D
SER 2ARG 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 35 helices in PDB entry 1EV9. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
16 26Right-handed alpha
Helix 2
2
A
37 47Right-handed alpha
Helix 3
3
A
67 79Right-handed alpha
Helix 4
4
A
87 110Right-handed alpha
Helix 5
5
A
113 115Right-handed 310
Helix 6
6
A
116 131Right-handed alpha
Helix 7
7
A
131 144Right-handed alpha
Helix 8
8
A
154 172Right-handed alpha
Helix 9
9
A
173 176Right-handed 310
Helix 10
10
A
178 190Right-handed alpha
Helix 11
11
A
191 199Right-handed alpha
Helix 12
12
A
210 217Right-handed alpha
Helix 13
13
C
13 26Right-handed alpha
Helix 14
14
C
37 48Right-handed alpha
Helix 15
15
C
67 79Right-handed alpha
Helix 16
16
C
85 108Right-handed alpha
Helix 17
17
C
109 111Right-handed 310
Helix 18
18
C
113 115Right-handed 310
Helix 19
19
C
116 130Right-handed alpha
Helix 20
20
C
131 142Right-handed alpha
Helix 21
21
C
154 172Right-handed alpha
Helix 22
22
C
173 177Right-handed 310
Helix 23
23
C
178 190Right-handed alpha
Helix 24
24
C
191 198Right-handed alpha
Helix 25
25
D
16 27Right-handed alpha
Helix 26
26
D
37 47Right-handed alpha
Helix 27
27
D
67 79Right-handed alpha
Helix 28
28
D
85 110Right-handed alpha
Helix 29
29
D
113 131Right-handed alpha
Helix 30
30
D
131 144Right-handed alpha
Helix 31
31
D
154 172Right-handed alpha
Helix 32
32
D
173 175Right-handed 310
Helix 33
33
D
178 190Right-handed alpha
Helix 34
34
D
191 199Right-handed alpha
Helix 35
35
D
209 215Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 1EV9. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
31 35first strand
Strand 2
A
6 10parallel
Strand 3
A
57 60anti-parallel
Strand 4
A
63 66anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
31 35first strand
Strand 2
C
6 10parallel
Strand 3
C
57 60anti-parallel
Strand 4
C
63 66anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
31 35first strand
Strand 2
D
6 10parallel
Strand 3
D
57 60anti-parallel
Strand 4
D
63 66anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il