Analysis of interatomic Contacts of Structural Units in PDB entry:
1EVJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1EVJ entry

There are 4 chains in PDB entry 1EVJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 30	TYR 381
B	ARG 30	TYR 381
C	ARG 30	TYR 381
D	ARG 30	TYR 381

There are 68 helices in PDB entry 1EVJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	40	46	Right-handed alpha
Helix 2	2	A	46	51	Right-handed alpha
Helix 3	3	A	52	54	Right-handed 310
Helix 4	4	A	66	78	Right-handed alpha
Helix 5	5	A	80	82	Right-handed 310
Helix 6	6	A	89	96	Right-handed 310
Helix 7	7	A	109	121	Right-handed alpha
Helix 8	8	A	134	149	Right-handed alpha
Helix 9	9	A	156	160	Right-handed 310
Helix 10	10	A	161	173	Right-handed alpha
Helix 11	11	A	198	201	Right-handed 310
Helix 12	12	A	202	207	Right-handed alpha
Helix 13	13	A	209	214	Right-handed alpha
Helix 14	14	A	214	227	Right-handed alpha
Helix 15	15	A	243	247	Right-handed 310
Helix 16	16	A	323	338	Right-handed alpha
Helix 17	17	A	345	366	Right-handed alpha
Helix 18	18	B	40	46	Right-handed alpha
Helix 19	19	B	46	51	Right-handed alpha
Helix 20	20	B	52	54	Right-handed 310
Helix 21	21	B	66	78	Right-handed alpha
Helix 22	22	B	80	82	Right-handed 310
Helix 23	23	B	89	96	Right-handed 310
Helix 24	24	B	109	121	Right-handed alpha
Helix 25	25	B	134	149	Right-handed alpha
Helix 26	26	B	156	160	Right-handed 310
Helix 27	27	B	161	173	Right-handed alpha
Helix 28	28	B	198	201	Right-handed 310
Helix 29	29	B	202	207	Right-handed alpha
Helix 30	30	B	209	214	Right-handed alpha
Helix 31	31	B	214	227	Right-handed alpha
Helix 32	32	B	243	247	Right-handed 310
Helix 33	33	B	323	338	Right-handed alpha
Helix 34	34	B	345	366	Right-handed alpha
Helix 35	35	C	40	46	Right-handed alpha
Helix 36	36	C	46	51	Right-handed alpha
Helix 37	37	C	52	54	Right-handed 310
Helix 38	38	C	66	78	Right-handed alpha
Helix 39	39	C	80	82	Right-handed 310
Helix 40	40	C	89	96	Right-handed 310
Helix 41	41	C	109	121	Right-handed alpha
Helix 42	42	C	134	149	Right-handed alpha
Helix 43	43	C	156	160	Right-handed 310
Helix 44	44	C	161	173	Right-handed alpha
Helix 45	45	C	198	201	Right-handed 310
Helix 46	46	C	202	207	Right-handed alpha
Helix 47	47	C	209	214	Right-handed alpha
Helix 48	48	C	214	227	Right-handed alpha
Helix 49	49	C	243	247	Right-handed 310
Helix 50	50	C	323	338	Right-handed alpha
Helix 51	51	C	345	366	Right-handed alpha
Helix 52	52	D	40	46	Right-handed alpha
Helix 53	53	D	46	51	Right-handed alpha
Helix 54	54	D	52	54	Right-handed 310
Helix 55	55	D	66	78	Right-handed alpha
Helix 56	56	D	80	82	Right-handed 310
Helix 57	57	D	89	96	Right-handed 310
Helix 58	58	D	109	121	Right-handed alpha
Helix 59	59	D	134	149	Right-handed alpha
Helix 60	60	D	156	160	Right-handed 310
Helix 61	61	D	161	173	Right-handed alpha
Helix 62	62	D	198	201	Right-handed 310
Helix 63	63	D	202	207	Right-handed alpha
Helix 64	64	D	209	214	Right-handed alpha
Helix 65	65	D	214	227	Right-handed alpha
Helix 66	66	D	243	247	Right-handed 310
Helix 67	67	D	323	338	Right-handed alpha
Helix 68	68	D	345	366	Right-handed alpha

There are 8 sheets in PDB entry 1EVJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	57	63	parallel
Strand 3	A	32	37	parallel
Strand 4	A	101	104	parallel
Strand 5	A	124	127	parallel
Strand 6	A	152	154	parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	301	304	first strand
Strand 2	A	287	290	anti-parallel
Strand 3	A	276	282	anti-parallel
Strand 4	A	181	187	anti-parallel
Strand 5	A	264	270	parallel
Strand 6	A	252	259	anti-parallel
Strand 7	A	230	238	anti-parallel
Strand 8	A	369	370	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	57	63	parallel
Strand 3	B	32	37	parallel
Strand 4	B	101	104	parallel
Strand 5	B	124	127	parallel
Strand 6	B	152	154	parallel

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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	301	304	first strand
Strand 2	B	287	290	anti-parallel
Strand 3	B	276	282	anti-parallel
Strand 4	B	181	187	anti-parallel
Strand 5	B	264	270	parallel
Strand 6	B	252	259	anti-parallel
Strand 7	B	230	238	anti-parallel
Strand 8	B	369	370	anti-parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	57	63	parallel
Strand 3	C	32	37	parallel
Strand 4	C	101	104	parallel
Strand 5	C	124	127	parallel
Strand 6	C	152	154	parallel

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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	304	first strand
Strand 2	C	287	290	anti-parallel
Strand 3	C	276	282	anti-parallel
Strand 4	C	181	187	anti-parallel
Strand 5	C	264	270	parallel
Strand 6	C	252	259	anti-parallel
Strand 7	C	230	238	anti-parallel
Strand 8	C	369	370	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	84	85	first strand
Strand 2	D	57	63	parallel
Strand 3	D	32	37	parallel
Strand 4	D	101	104	parallel
Strand 5	D	124	127	parallel
Strand 6	D	152	154	parallel

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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	301	304	first strand
Strand 2	D	287	290	anti-parallel
Strand 3	D	276	282	anti-parallel
Strand 4	D	181	187	anti-parallel
Strand 5	D	264	270	parallel
Strand 6	D	252	259	anti-parallel
Strand 7	D	230	238	anti-parallel
Strand 8	D	369	370	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1EVJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
1EVJ