Analysis of interatomic Contacts of Structural Units in PDB entry:
1EVL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1EVL entry

There are 4 chains in PDB entry 1EVL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 242	GLU 642
B	ARG 242	GLU 642
C	ARG 242	GLU 642
D	ARG 242	GLU 642

There are 72 helices in PDB entry 1EVL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	243	251	Right-handed alpha
Helix 2	2	A	267	288	Right-handed alpha
Helix 3	3	A	301	307	Right-handed alpha
Helix 4	4	A	308	313	Right-handed alpha
Helix 5	5	A	314	317	Right-handed 310
Helix 6	6	A	333	342	Right-handed alpha
Helix 7	7	A	348	351	Right-handed 310
Helix 8	8	A	366	370	Right-handed 310
Helix 9	9	A	389	391	Right-handed 310
Helix 10	10	A	392	410	Right-handed alpha
Helix 11	11	A	430	448	Right-handed alpha
Helix 12	12	A	488	493	Right-handed alpha
Helix 13	13	A	518	530	Right-handed alpha
Helix 14	14	A	548	550	Right-handed 310
Helix 15	15	A	551	565	Right-handed alpha
Helix 16	16	A	577	588	Right-handed alpha
Helix 17	17	A	597	604	Right-handed alpha
Helix 18	18	A	621	634	Right-handed alpha
Helix 19	19	B	243	251	Right-handed alpha
Helix 20	20	B	267	287	Right-handed alpha
Helix 21	21	B	301	308	Right-handed alpha
Helix 22	22	B	308	313	Right-handed alpha
Helix 23	23	B	314	317	Right-handed 310
Helix 24	24	B	333	342	Right-handed alpha
Helix 25	25	B	348	351	Right-handed 310
Helix 26	26	B	366	370	Right-handed 310
Helix 27	27	B	389	391	Right-handed 310
Helix 28	28	B	392	411	Right-handed alpha
Helix 29	29	B	430	448	Right-handed alpha
Helix 30	30	B	488	493	Right-handed alpha
Helix 31	31	B	518	530	Right-handed alpha
Helix 32	32	B	548	550	Right-handed 310
Helix 33	33	B	551	565	Right-handed alpha
Helix 34	34	B	577	588	Right-handed alpha
Helix 35	35	B	597	602	Right-handed alpha
Helix 36	36	B	621	634	Right-handed alpha
Helix 37	37	C	243	251	Right-handed alpha
Helix 38	38	C	267	287	Right-handed alpha
Helix 39	39	C	301	307	Right-handed alpha
Helix 40	40	C	308	313	Right-handed alpha
Helix 41	41	C	314	317	Right-handed 310
Helix 42	42	C	333	342	Right-handed alpha
Helix 43	43	C	348	351	Right-handed 310
Helix 44	44	C	366	370	Right-handed 310
Helix 45	45	C	389	391	Right-handed 310
Helix 46	46	C	392	411	Right-handed alpha
Helix 47	47	C	430	448	Right-handed alpha
Helix 48	48	C	488	493	Right-handed alpha
Helix 49	49	C	518	530	Right-handed alpha
Helix 50	50	C	548	550	Right-handed 310
Helix 51	51	C	551	565	Right-handed alpha
Helix 52	52	C	577	588	Right-handed alpha
Helix 53	53	C	597	602	Right-handed alpha
Helix 54	54	C	621	634	Right-handed alpha
Helix 55	55	D	243	251	Right-handed alpha
Helix 56	56	D	267	288	Right-handed alpha
Helix 57	57	D	301	307	Right-handed alpha
Helix 58	58	D	308	313	Right-handed alpha
Helix 59	59	D	314	317	Right-handed 310
Helix 60	60	D	333	342	Right-handed alpha
Helix 61	61	D	348	351	Right-handed 310
Helix 62	62	D	366	370	Right-handed 310
Helix 63	63	D	389	391	Right-handed 310
Helix 64	64	D	392	410	Right-handed alpha
Helix 65	65	D	430	448	Right-handed alpha
Helix 66	66	D	488	493	Right-handed alpha
Helix 67	67	D	518	530	Right-handed alpha
Helix 68	68	D	548	550	Right-handed 310
Helix 69	69	D	551	565	Right-handed alpha
Helix 70	70	D	577	588	Right-handed alpha
Helix 71	71	D	597	602	Right-handed alpha
Helix 72	72	D	621	634	Right-handed alpha

There are 20 sheets in PDB entry 1EVL. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	254	255	first strand
Strand 2	A	265	266	anti-parallel

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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	292	first strand
Strand 2	A	353	362	parallel
Strand 3	A	378	388	anti-parallel
Strand 4	A	508	517	anti-parallel
Strand 5	A	477	486	anti-parallel
Strand 6	A	465	471	anti-parallel
Strand 7	A	417	421	anti-parallel
Strand 8	A	453	455	parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	298	300	first strand
Strand 2	A	325	329	anti-parallel
Strand 3	A	319	322	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	497	498	first strand
Strand 2	A	504	505	anti-parallel

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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	572	first strand
Strand 2	A	542	546	parallel
Strand 3	A	592	596	parallel
Strand 4	A	605	610	anti-parallel
Strand 5	A	615	620	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	254	255	first strand
Strand 2	B	265	266	anti-parallel

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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	292	first strand
Strand 2	B	353	362	parallel
Strand 3	B	378	388	anti-parallel
Strand 4	B	508	517	anti-parallel
Strand 5	B	477	486	anti-parallel
Strand 6	B	465	471	anti-parallel
Strand 7	B	417	421	anti-parallel
Strand 8	B	452	455	parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	298	300	first strand
Strand 2	B	325	329	anti-parallel
Strand 3	B	319	322	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	497	498	first strand
Strand 2	B	504	505	anti-parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	569	572	first strand
Strand 2	B	542	546	parallel
Strand 3	B	592	596	parallel
Strand 4	B	605	610	anti-parallel
Strand 5	B	615	620	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	254	255	first strand
Strand 2	C	265	266	anti-parallel

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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	291	292	first strand
Strand 2	C	353	362	parallel
Strand 3	C	378	388	anti-parallel
Strand 4	C	508	517	anti-parallel
Strand 5	C	477	486	anti-parallel
Strand 6	C	465	471	anti-parallel
Strand 7	C	417	421	anti-parallel
Strand 8	C	452	455	parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	298	300	first strand
Strand 2	C	325	329	anti-parallel
Strand 3	C	319	322	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	497	498	first strand
Strand 2	C	504	505	anti-parallel

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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	569	572	first strand
Strand 2	C	542	546	parallel
Strand 3	C	592	596	parallel
Strand 4	C	605	610	anti-parallel
Strand 5	C	615	620	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	254	255	first strand
Strand 2	D	265	266	anti-parallel

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There are 8 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	291	292	first strand
Strand 2	D	353	362	parallel
Strand 3	D	378	388	anti-parallel
Strand 4	D	508	517	anti-parallel
Strand 5	D	477	486	anti-parallel
Strand 6	D	465	471	anti-parallel
Strand 7	D	417	421	anti-parallel
Strand 8	D	453	455	parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	300	first strand
Strand 2	D	325	329	anti-parallel
Strand 3	D	319	322	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	497	498	first strand
Strand 2	D	504	505	anti-parallel

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There are 5 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	569	572	first strand
Strand 2	D	542	546	parallel
Strand 3	D	592	596	parallel
Strand 4	D	605	610	anti-parallel
Strand 5	D	615	620	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1EVL

Analysis of interatomic Contacts of Structural Units in PDB entry:
1EVL