Analysis of interatomic Contacts of Structural Units in PDB entry:
1EWH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EWH entry

There are 3 chains in PDB entry 1EWH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 1ARG 251
B
TYR 1ARG 251
C
TYR 1ARG 251
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1EWH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
1 9Right-handed alpha
Helix 2
2
A
20 24Right-handed 310
Helix 3
3
A
85 89Right-handed 310
Helix 4
4
A
90 98Right-handed alpha
Helix 5
5
A
120 124Right-handed alpha
Helix 6
6
B
1 9Right-handed alpha
Helix 7
7
B
20 24Right-handed 310
Helix 8
8
B
85 89Right-handed 310
Helix 9
9
B
90 98Right-handed alpha
Helix 10
10
B
120 124Right-handed alpha
Helix 11
11
C
1 9Right-handed alpha
Helix 12
12
C
20 24Right-handed 310
Helix 13
13
C
85 89Right-handed 310
Helix 14
14
C
90 98Right-handed alpha
Helix 15
15
C
120 124Right-handed alpha
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There are 12 sheets in PDB entry 1EWH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
32 34first strand
Strand 2
A
44 50anti-parallel
Strand 3
A
125 131anti-parallel
Strand 4
A
82 83anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
38 39first strand
Strand 2
A
236 246parallel
Strand 3
A
145 154anti-parallel
Strand 4
A
70 76anti-parallel
Strand 5
A
112 119anti-parallel
Strand 6
A
103 104anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
59 60first strand
Strand 2
A
66 67anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
203 208first strand
Strand 2
A
192 197anti-parallel
Strand 3
A
177 183anti-parallel
Strand 4
A
221 222anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
32 34first strand
Strand 2
B
44 50anti-parallel
Strand 3
B
125 131anti-parallel
Strand 4
B
82 83anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
38 39first strand
Strand 2
B
236 246parallel
Strand 3
B
145 154anti-parallel
Strand 4
B
70 76anti-parallel
Strand 5
B
112 119anti-parallel
Strand 6
B
103 104anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
59 60first strand
Strand 2
B
66 67anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
203 208first strand
Strand 2
B
190 198anti-parallel
Strand 3
B
177 186anti-parallel
Strand 4
B
221 222anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
32 34first strand
Strand 2
C
44 50anti-parallel
Strand 3
C
125 131anti-parallel
Strand 4
C
82 83anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
38 39first strand
Strand 2
C
236 246parallel
Strand 3
C
145 154anti-parallel
Strand 4
C
70 76anti-parallel
Strand 5
C
112 119anti-parallel
Strand 6
C
103 104anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
59 60first strand
Strand 2
C
66 67anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
203 208first strand
Strand 2
C
190 197anti-parallel
Strand 3
C
177 186anti-parallel
Strand 4
C
221 222anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il