Analysis of interatomic Contacts of Structural Units in PDB entry:
1EYB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1EYB entry

There is 1 chain in PDB entry 1EYB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2ASN 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1EYB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 39Right-handed 310
Helix 2
2
A
52 56Right-handed 310
Helix 3
3
A
84 88Right-handed 310
Helix 4
4
A
124 128Right-handed 310
Helix 5
5
A
213 217Right-handed 310
Helix 6
6
A
223 225Right-handed 310
Helix 7
7
A
280 282Right-handed 310
Helix 8
8
A
294 297Right-handed 310
Helix 9
9
A
374 384Right-handed alpha
Helix 10
10
A
409 416Right-handed alpha
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There are 6 sheets in PDB entry 1EYB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 8first strand
Strand 2
A
227 230anti-parallel
Strand 3
A
275 278anti-parallel
Strand 4
A
178 182anti-parallel
Strand 5
A
152 160anti-parallel
Strand 6
A
196 204anti-parallel
Strand 7
A
131 138anti-parallel
Strand 8
A
116 122anti-parallel
Strand 9
A
407 408anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 17first strand
Strand 2
A
265 270anti-parallel
Strand 3
A
58 63anti-parallel
Strand 4
A
40 45anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 75first strand
Strand 2
A
252 260anti-parallel
Strand 3
A
238 249anti-parallel
Strand 4
A
145 149parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 97first strand
Strand 2
A
362 365anti-parallel
Strand 3
A
340 347anti-parallel
Strand 4
A
396 402anti-parallel
Strand 5
A
311 318anti-parallel
Strand 6
A
299 304anti-parallel
Strand 7
A
208 209anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 174first strand
Strand 2
A
163 167anti-parallel
Strand 3
A
188 191anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 323first strand
Strand 2
A
389 391anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il