Analysis of interatomic Contacts of Structural Units in PDB entry:
1F0L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F0L entry

There are 2 chains in PDB entry 1F0L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1SER 535
B
 GLY 1SER 535
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 1F0L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 6Right-handed alpha
Helix 2
2
A
7 11Right-handed 310
Helix 3
3
A
29 34Right-handed 310
Helix 4
4
A
47 51Right-handed 310
Helix 5
5
A
58 64Right-handed alpha
Helix 6
6
A
98 106Right-handed alpha
Helix 7
7
A
113 119Right-handed alpha
Helix 8
8
A
120 128Right-handed alpha
Helix 9
9
A
154 159Right-handed 310
Helix 10
10
A
168 171Right-handed 310
Helix 11
11
A
175 184Right-handed alpha
Helix 12
12
A
205 222Right-handed alpha
Helix 13
13
A
223 232Right-handed alpha
Helix 14
14
A
239 255Right-handed alpha
Helix 15
15
A
256 259Right-handed 310
Helix 16
16
A
260 268Right-handed alpha
Helix 17
17
A
269 273Right-handed 310
Helix 18
18
A
274 289Right-handed alpha
Helix 19
19
A
290 295Right-handed alpha
Helix 20
20
A
296 305Right-handed alpha
Helix 21
21
A
309 315Right-handed alpha
Helix 22
22
A
325 348Right-handed alpha
Helix 23
23
A
358 376Right-handed alpha
Helix 24
24
A
400 403Right-handed 310
Helix 25
25
B
1 5Right-handed 310
Helix 26
26
B
7 11Right-handed 310
Helix 27
27
B
27 32Right-handed alpha
Helix 28
28
B
47 51Right-handed 310
Helix 29
29
B
58 64Right-handed alpha
Helix 30
30
B
98 106Right-handed alpha
Helix 31
31
B
113 119Right-handed alpha
Helix 32
32
B
120 128Right-handed alpha
Helix 33
33
B
154 159Right-handed 310
Helix 34
34
B
168 171Right-handed 310
Helix 35
35
B
175 185Right-handed alpha
Helix 36
36
B
205 223Right-handed alpha
Helix 37
37
B
223 233Right-handed alpha
Helix 38
38
B
239 255Right-handed alpha
Helix 39
39
B
256 259Right-handed 310
Helix 40
40
B
260 268Right-handed alpha
Helix 41
41
B
269 273Right-handed 310
Helix 42
42
B
274 289Right-handed alpha
Helix 43
43
B
290 295Right-handed alpha
Helix 44
44
B
296 305Right-handed alpha
Helix 45
45
B
309 315Right-handed alpha
Helix 46
46
B
325 344Right-handed alpha
Helix 47
47
B
352 357Right-handed 310
Helix 48
48
B
358 376Right-handed alpha
Helix 49
49
B
400 403Right-handed 310
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There are 15 sheets in PDB entry 1F0L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
12 15first strand
Strand 2
A
88 93anti-parallel
Strand 3
A
133 139parallel
Strand 4
A
147 151anti-parallel
Strand 5
A
53 56anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 23first strand
Strand 2
A
79 84anti-parallel
Strand 3
A
160 166anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 317first strand
Strand 2
A
320 321anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 391first strand
Strand 2
A
394 398anti-parallel
Strand 3
A
413 422anti-parallel
Strand 4
A
485 493anti-parallel
Strand 5
A
441 443anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
389 391first strand
Strand 2
A
394 398anti-parallel
Strand 3
A
413 422anti-parallel
Strand 4
A
485 493anti-parallel
Strand 5
A
449 452anti-parallel
Strand 6
A
455 457anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 407first strand
Strand 2
A
532 534parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
427 429first strand
Strand 2
A
477 479anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 464first strand
Strand 2
A
468 473anti-parallel
Strand 3
A
431 435anti-parallel
Strand 4
A
508 518anti-parallel
Strand 5
A
521 530anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 15first strand
Strand 2
B
88 93anti-parallel
Strand 3
B
133 139parallel
Strand 4
B
147 151anti-parallel
Strand 5
B
53 56anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 23first strand
Strand 2
B
79 84anti-parallel
Strand 3
B
160 166anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
316 317first strand
Strand 2
B
320 321anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
389 391first strand
Strand 2
B
394 398anti-parallel
Strand 3
B
413 422anti-parallel
Strand 4
B
485 493anti-parallel
Strand 5
B
441 443anti-parallel
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There are 10 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
389 391first strand
Strand 2
B
394 398anti-parallel
Strand 3
B
413 422anti-parallel
Strand 4
B
485 493anti-parallel
Strand 5
B
449 452anti-parallel
Strand 6
B
455 464anti-parallel
Strand 7
B
468 473anti-parallel
Strand 8
B
431 435anti-parallel
Strand 9
B
508 518anti-parallel
Strand 10
B
521 530anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
405 407first strand
Strand 2
B
532 534parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
427 429first strand
Strand 2
B
477 479anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il