Analysis of interatomic Contacts of Structural Units in PDB entry:
1F0V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F0V entry

There are 8 chains in PDB entry 1F0V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
M
 C 751 G 752
N
 C 753 G 754
O
 C 755 G 756
P
 C 757 G 758
A
 LYS 1VAL 124
B
 LYS 201VAL 324
C
 LYS 401VAL 524
D
 LYS 601VAL 724
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1F0V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 13Right-handed alpha
Helix 2
2
A
24 33Right-handed alpha
Helix 3
3
A
50 57Right-handed alpha
Helix 4
4
A
58 60Right-handed 310
Helix 5
5
B
203 213Right-handed alpha
Helix 6
6
B
224 233Right-handed alpha
Helix 7
7
B
250 257Right-handed alpha
Helix 8
8
B
258 260Right-handed 310
Helix 9
9
C
403 413Right-handed alpha
Helix 10
10
C
424 433Right-handed alpha
Helix 11
11
C
450 457Right-handed alpha
Helix 12
12
C
458 460Right-handed 310
Helix 13
13
D
603 613Right-handed alpha
Helix 14
14
D
624 633Right-handed alpha
Helix 15
15
D
650 656Right-handed alpha
Helix 16
16
D
657 660Right-handed 310
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There are 6 sheets in PDB entry 1F0V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 47first strand
Strand 2
A
79 86anti-parallel
Strand 3
A
97 104anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
72 74anti-parallel
Strand 3
A
106 124anti-parallel
Strand 4
B
297 323anti-parallel
Strand 5
B
272 274anti-parallel
Strand 6
B
261 263anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
72 74anti-parallel
Strand 3
A
106 124anti-parallel
Strand 4
B
297 323anti-parallel
Strand 5
B
279 286anti-parallel
Strand 6
B
243 247anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
661 663first strand
Strand 2
D
672 674anti-parallel
Strand 3
D
706 724anti-parallel
Strand 4
C
497 523anti-parallel
Strand 5
C
472 474anti-parallel
Strand 6
C
461 463anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
661 663first strand
Strand 2
D
672 674anti-parallel
Strand 3
D
706 724anti-parallel
Strand 4
C
497 523anti-parallel
Strand 5
C
479 486anti-parallel
Strand 6
C
443 447anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
643 647first strand
Strand 2
D
679 686anti-parallel
Strand 3
D
697 704anti-parallel
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