Analysis of interatomic Contacts of Structural Units in PDB entry:
1F0X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F0X entry

There are 2 chains in PDB entry 1F0X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 9TRP 567
B
 ASN 1009TRP 1567
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 1F0X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 21Right-handed alpha
Helix 2
2
A
28 37Right-handed alpha
Helix 3
3
A
54 68Right-handed alpha
Helix 4
4
A
123 132Right-handed alpha
Helix 5
5
A
142 148Right-handed 310
Helix 6
6
A
150 157Right-handed alpha
Helix 7
7
A
198 208Right-handed alpha
Helix 8
8
A
212 215Right-handed 310
Helix 9
9
A
227 234Right-handed alpha
Helix 10
10
A
246 250Right-handed 310
Helix 11
11
A
285 300Right-handed alpha
Helix 12
12
A
312 319Right-handed alpha
Helix 13
13
A
378 388Right-handed alpha
Helix 14
14
A
399 415Right-handed alpha
Helix 15
15
A
423 435Right-handed alpha
Helix 16
16
A
436 448Right-handed alpha
Helix 17
17
A
474 479Right-handed alpha
Helix 18
18
A
506 521Right-handed alpha
Helix 19
19
A
538 549Right-handed alpha
Helix 20
20
B
1009 1021Right-handed alpha
Helix 21
21
B
1028 1037Right-handed alpha
Helix 22
22
B
1054 1068Right-handed alpha
Helix 23
23
B
1123 1132Right-handed alpha
Helix 24
24
B
1144 1148Right-handed 310
Helix 25
25
B
1150 1158Right-handed alpha
Helix 26
26
B
1198 1208Right-handed alpha
Helix 27
27
B
1212 1215Right-handed 310
Helix 28
28
B
1227 1234Right-handed alpha
Helix 29
29
B
1246 1250Right-handed 310
Helix 30
30
B
1285 1300Right-handed alpha
Helix 31
31
B
1312 1319Right-handed alpha
Helix 32
32
B
1378 1388Right-handed alpha
Helix 33
33
B
1399 1412Right-handed alpha
Helix 34
34
B
1423 1435Right-handed alpha
Helix 35
35
B
1436 1448Right-handed alpha
Helix 36
36
B
1474 1479Right-handed alpha
Helix 37
37
B
1506 1522Right-handed alpha
Helix 38
38
B
1538 1549Right-handed alpha
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There are 8 sheets in PDB entry 1F0X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 26first strand
Strand 2
A
48 50anti-parallel
Strand 3
A
96 100parallel
Strand 4
A
71 75parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 110first strand
Strand 2
A
115 118anti-parallel
Strand 3
A
261 268anti-parallel
Strand 4
A
174 179anti-parallel
Strand 5
A
185 189anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
270 271anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 421first strand
Strand 2
A
277 283anti-parallel
Strand 3
A
390 396anti-parallel
Strand 4
A
306 311anti-parallel
Strand 5
A
481 489anti-parallel
Strand 6
A
494 502anti-parallel
Strand 7
A
452 461anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1025 1026first strand
Strand 2
B
1048 1050anti-parallel
Strand 3
B
1096 1100parallel
Strand 4
B
1071 1075parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1107 1110first strand
Strand 2
B
1115 1118anti-parallel
Strand 3
B
1261 1268anti-parallel
Strand 4
B
1174 1179anti-parallel
Strand 5
B
1185 1189anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1136 1137first strand
Strand 2
B
1270 1271anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1418 1421first strand
Strand 2
B
1277 1283anti-parallel
Strand 3
B
1390 1396anti-parallel
Strand 4
B
1306 1311anti-parallel
Strand 5
B
1481 1489anti-parallel
Strand 6
B
1494 1501anti-parallel
Strand 7
B
1456 1461anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il