Analysis of interatomic Contacts of Structural Units in PDB entry:
1F2U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F2U entry

There are 4 chains in PDB entry 1F2U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 149
B
 ALA 738SER 882
C
 MET 1GLU 148
D
 ARG 741SER 882
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 1F2U. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 49Right-handed alpha
Helix 2
2
A
57 62Right-handed alpha
Helix 3
3
A
115 127Right-handed alpha
Helix 4
4
A
128 136Right-handed alpha
Helix 5
5
A
144 148Right-handed 310
Helix 6
6
B
738 760Right-handed alpha
Helix 7
7
B
790 792Right-handed 310
Helix 8
8
B
793 812Right-handed alpha
Helix 9
9
B
829 844Right-handed alpha
Helix 10
10
B
845 847Right-handed 310
Helix 11
11
B
856 861Right-handed 310
Helix 12
12
C
35 49Right-handed alpha
Helix 13
13
C
57 62Right-handed alpha
Helix 14
14
C
92 96Right-handed 310
Helix 15
15
C
115 127Right-handed alpha
Helix 16
16
C
128 136Right-handed alpha
Helix 17
17
D
741 760Right-handed alpha
Helix 18
18
D
790 792Right-handed 310
Helix 19
19
D
793 812Right-handed alpha
Helix 20
20
D
829 843Right-handed alpha
Helix 21
21
D
844 847Right-handed 310
Helix 22
22
D
856 863Right-handed 310
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There are 6 sheets in PDB entry 1F2U. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 20first strand
Strand 2
A
2 11anti-parallel
Strand 3
A
68 77anti-parallel
Strand 4
A
80 89anti-parallel
Strand 5
A
97 104anti-parallel
Strand 6
A
107 110anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 138first strand
Strand 2
B
818 822parallel
Strand 3
B
849 854parallel
Strand 4
A
24 30parallel
Strand 5
B
865 872parallel
Strand 6
B
875 880anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
766 771first strand
Strand 2
B
776 782anti-parallel
Strand 3
B
785 788anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 20first strand
Strand 2
C
2 11anti-parallel
Strand 3
C
68 77anti-parallel
Strand 4
C
80 89anti-parallel
Strand 5
C
97 104anti-parallel
Strand 6
C
107 110anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
137 138first strand
Strand 2
D
818 822parallel
Strand 3
D
849 854parallel
Strand 4
C
24 29parallel
Strand 5
D
865 871parallel
Strand 6
D
876 880anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
766 770first strand
Strand 2
D
777 782anti-parallel
Strand 3
D
785 788anti-parallel
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