Analysis of interatomic Contacts of Structural Units in PDB entry:
1F3B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F3B entry

There are 4 chains in PDB entry 1F3B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LEU 110
A
 PRO 112GLN 222
B
 ALA 1LEU 110
B
 PRO 112GLN 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 1F3B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 25Right-handed alpha
Helix 2
2
A
36 46Right-handed alpha
Helix 3
3
A
66 78Right-handed alpha
Helix 4
4
A
84 107Right-handed alpha
Helix 5
5
A
108 110Right-handed 310
Helix 6
6
A
112 130Right-handed alpha
Helix 7
7
A
130 143Right-handed alpha
Helix 8
8
A
153 170Right-handed alpha
Helix 9
9
A
171 174Right-handed 310
Helix 10
10
A
177 189Right-handed alpha
Helix 11
11
A
190 198Right-handed alpha
Helix 12
12
A
208 220Right-handed alpha
Helix 13
13
B
15 26Right-handed alpha
Helix 14
14
B
36 46Right-handed alpha
Helix 15
15
B
66 78Right-handed alpha
Helix 16
16
B
84 108Right-handed alpha
Helix 17
17
B
112 130Right-handed alpha
Helix 18
18
B
130 143Right-handed alpha
Helix 19
19
B
153 170Right-handed alpha
Helix 20
20
B
171 174Right-handed 310
Helix 21
21
B
177 189Right-handed alpha
Helix 22
22
B
190 198Right-handed alpha
Helix 23
23
B
208 219Right-handed alpha
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There are 2 sheets in PDB entry 1F3B. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
5 9parallel
Strand 3
A
56 59anti-parallel
Strand 4
A
62 65anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
5 9parallel
Strand 3
B
56 59anti-parallel
Strand 4
B
62 65anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il