Analysis of interatomic Contacts of Structural Units in PDB entry:
1F3T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F3T entry

There are 4 chains in PDB entry 1F3T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 14SER 422
B
 ARG 14SER 422
C
 ARG 14VAL 409
D
 ARG 14VAL 409
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 67 helices in PDB entry 1F3T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 29Right-handed alpha
Helix 2
2
A
45 59Right-handed alpha
Helix 3
3
A
69 71Right-handed 310
Helix 4
4
A
73 83Right-handed alpha
Helix 5
5
A
91 101Right-handed alpha
Helix 6
6
A
104 106Right-handed 310
Helix 7
7
A
116 126Right-handed alpha
Helix 8
8
A
135 146Right-handed alpha
Helix 9
9
A
173 187Right-handed alpha
Helix 10
10
A
205 225Right-handed alpha
Helix 11
11
A
247 263Right-handed alpha
Helix 12
12
A
276 281Right-handed alpha
Helix 13
13
A
324 326Right-handed 310
Helix 14
14
A
327 332Right-handed alpha
Helix 15
15
A
390 394Right-handed 310
Helix 16
16
A
396 400Right-handed 310
Helix 17
17
A
415 421Right-handed alpha
Helix 18
18
B
20 29Right-handed alpha
Helix 19
19
B
45 59Right-handed alpha
Helix 20
20
B
69 71Right-handed 310
Helix 21
21
B
73 83Right-handed alpha
Helix 22
22
B
91 101Right-handed alpha
Helix 23
23
B
104 106Right-handed 310
Helix 24
24
B
116 127Right-handed alpha
Helix 25
25
B
135 146Right-handed alpha
Helix 26
26
B
173 175Right-handed 310
Helix 27
27
B
176 187Right-handed alpha
Helix 28
28
B
205 225Right-handed alpha
Helix 29
29
B
247 263Right-handed alpha
Helix 30
30
B
276 281Right-handed alpha
Helix 31
31
B
326 332Right-handed alpha
Helix 32
32
B
390 394Right-handed 310
Helix 33
33
B
396 400Right-handed 310
Helix 34
34
B
413 422Right-handed alpha
Helix 35
35
C
20 29Right-handed alpha
Helix 36
36
C
45 59Right-handed alpha
Helix 37
37
C
69 71Right-handed 310
Helix 38
38
C
73 83Right-handed alpha
Helix 39
39
C
91 101Right-handed alpha
Helix 40
40
C
104 106Right-handed 310
Helix 41
41
C
116 126Right-handed alpha
Helix 42
42
C
135 146Right-handed alpha
Helix 43
43
C
173 175Right-handed 310
Helix 44
44
C
176 187Right-handed alpha
Helix 45
45
C
205 225Right-handed alpha
Helix 46
46
C
247 263Right-handed alpha
Helix 47
47
C
276 281Right-handed alpha
Helix 48
48
C
324 326Right-handed 310
Helix 49
49
C
327 332Right-handed alpha
Helix 50
50
C
390 394Right-handed 310
Helix 51
51
C
396 400Right-handed 310
Helix 52
52
D
20 29Right-handed alpha
Helix 53
53
D
45 59Right-handed alpha
Helix 54
54
D
69 71Right-handed 310
Helix 55
55
D
73 84Right-handed alpha
Helix 56
56
D
91 101Right-handed alpha
Helix 57
57
D
104 106Right-handed 310
Helix 58
58
D
116 127Right-handed alpha
Helix 59
59
D
135 146Right-handed alpha
Helix 60
60
D
173 175Right-handed 310
Helix 61
61
D
176 187Right-handed alpha
Helix 62
62
D
205 225Right-handed alpha
Helix 63
63
D
247 263Right-handed alpha
Helix 64
64
D
276 281Right-handed alpha
Helix 65
65
D
326 332Right-handed alpha
Helix 66
66
D
390 394Right-handed 310
Helix 67
67
D
396 400Right-handed 310
Back to top of page

There are 12 sheets in PDB entry 1F3T. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 373first strand
Strand 2
A
350 356anti-parallel
Strand 3
A
314 318parallel
Strand 4
A
284 295anti-parallel
Strand 5
A
40 44anti-parallel
Strand 6
A
404 408parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 373first strand
Strand 2
A
350 356anti-parallel
Strand 3
A
314 318parallel
Strand 4
A
284 295anti-parallel
Strand 5
A
380 383anti-parallel
Strand 6
A
339 340anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 67first strand
Strand 2
A
86 89parallel
Strand 3
A
108 110parallel
Strand 4
A
130 133parallel
Strand 5
A
150 154parallel
Strand 6
A
190 195parallel
Strand 7
A
231 233parallel
Strand 8
A
270 273parallel
Strand 9
A
62 67parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 373first strand
Strand 2
B
350 356anti-parallel
Strand 3
B
314 318parallel
Strand 4
B
284 295anti-parallel
Strand 5
B
40 44anti-parallel
Strand 6
B
404 408parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 373first strand
Strand 2
B
350 356anti-parallel
Strand 3
B
314 318parallel
Strand 4
B
284 295anti-parallel
Strand 5
B
380 383anti-parallel
Strand 6
B
339 340anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 67first strand
Strand 2
B
86 89parallel
Strand 3
B
108 110parallel
Strand 4
B
130 133parallel
Strand 5
B
150 154parallel
Strand 6
B
191 195parallel
Strand 7
B
231 233parallel
Strand 8
B
270 273parallel
Strand 9
B
62 67parallel
Back to list of sheets
Back to top of page

There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
365 373first strand
Strand 2
C
350 356anti-parallel
Strand 3
C
314 318parallel
Strand 4
C
284 295anti-parallel
Strand 5
C
40 44anti-parallel
Strand 6
C
404 408parallel
Back to list of sheets
Back to top of page

There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
365 373first strand
Strand 2
C
350 356anti-parallel
Strand 3
C
314 318parallel
Strand 4
C
284 295anti-parallel
Strand 5
C
380 383anti-parallel
Strand 6
C
339 340anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
62 67first strand
Strand 2
C
86 89parallel
Strand 3
C
108 110parallel
Strand 4
C
130 133parallel
Strand 5
C
150 154parallel
Strand 6
C
190 195parallel
Strand 7
C
231 233parallel
Strand 8
C
270 273parallel
Strand 9
C
62 67parallel
Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
365 373first strand
Strand 2
D
350 356anti-parallel
Strand 3
D
314 318parallel
Strand 4
D
284 295anti-parallel
Strand 5
D
40 44anti-parallel
Strand 6
D
404 408parallel
Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
365 373first strand
Strand 2
D
350 356anti-parallel
Strand 3
D
314 318parallel
Strand 4
D
284 295anti-parallel
Strand 5
D
380 383anti-parallel
Strand 6
D
339 340anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
62 67first strand
Strand 2
D
86 89parallel
Strand 3
D
108 110parallel
Strand 4
D
130 133parallel
Strand 5
D
150 154parallel
Strand 6
D
190 195parallel
Strand 7
D
231 233parallel
Strand 8
D
270 273parallel
Strand 9
D
62 67parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il