Analysis of interatomic Contacts of Structural Units in PDB entry:
1F48


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F48 entry

There is 1 chain in PDB entry 1F48 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 586
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 1F48. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 5Right-handed 310
Helix 2
2
A
20 34Right-handed alpha
Helix 3
3
A
49 54Right-handed alpha
Helix 4
4
A
77 91Right-handed alpha
Helix 5
5
A
92 94Right-handed 310
Helix 6
6
A
98 109Right-handed alpha
Helix 7
7
A
111 129Right-handed alpha
Helix 8
8
A
131 136Right-handed alpha
Helix 9
9
A
146 155Right-handed alpha
Helix 10
10
A
156 159Right-handed 310
Helix 11
11
A
173 179Right-handed 310
Helix 12
12
A
182 195Right-handed alpha
Helix 13
13
A
208 225Right-handed alpha
Helix 14
14
A
239 244Right-handed 310
Helix 15
15
A
246 262Right-handed alpha
Helix 16
16
A
264 268Right-handed 310
Helix 17
17
A
284 291Right-handed alpha
Helix 18
18
A
314 324Right-handed alpha
Helix 19
19
A
339 354Right-handed alpha
Helix 20
20
A
386 403Right-handed alpha
Helix 21
21
A
407 418Right-handed alpha
Helix 22
22
A
420 433Right-handed alpha
Helix 23
23
A
434 441Right-handed 310
Helix 24
24
A
451 460Right-handed alpha
Helix 25
25
A
481 487Right-handed alpha
Helix 26
26
A
500 517Right-handed alpha
Helix 27
27
A
537 547Right-handed alpha
Helix 28
28
A
547 558Right-handed alpha
Helix 29
29
A
574 583Right-handed alpha
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There are 2 sheets in PDB entry 1F48. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 64first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
39 43parallel
Strand 4
A
138 141parallel
Strand 5
A
10 14parallel
Strand 6
A
199 206parallel
Strand 7
A
230 237parallel
Strand 8
A
272 276parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 384first strand
Strand 2
A
358 362parallel
Strand 3
A
443 446parallel
Strand 4
A
328 333parallel
Strand 5
A
491 497parallel
Strand 6
A
523 529parallel
Strand 7
A
562 566parallel
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