Analysis of interatomic Contacts of Structural Units in PDB entry:
1F5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F5Z entry

There are 4 chains in PDB entry 1F5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 293
B
 MET 1SER 293
C
 MET 1SER 293
D
 MET 1SER 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 64 helices in PDB entry 1F5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 36Right-handed alpha
Helix 2
2
A
46 50Right-handed 310
Helix 3
3
A
50 54Right-handed 310
Helix 4
4
A
55 71Right-handed alpha
Helix 5
5
A
84 99Right-handed alpha
Helix 6
6
A
114 130Right-handed alpha
Helix 7
7
A
138 143Right-handed alpha
Helix 8
8
A
147 156Right-handed alpha
Helix 9
9
A
169 180Right-handed alpha
Helix 10
10
A
189 191Right-handed 310
Helix 11
11
A
192 199Right-handed alpha
Helix 12
12
A
208 213Right-handed alpha
Helix 13
13
A
212 225Right-handed alpha
Helix 14
14
A
227 249Right-handed alpha
Helix 15
15
A
249 261Right-handed alpha
Helix 16
16
A
277 292Right-handed alpha
Helix 17
17
B
22 36Right-handed alpha
Helix 18
18
B
46 50Right-handed 310
Helix 19
19
B
50 54Right-handed 310
Helix 20
20
B
55 71Right-handed alpha
Helix 21
21
B
84 99Right-handed alpha
Helix 22
22
B
114 130Right-handed alpha
Helix 23
23
B
138 143Right-handed alpha
Helix 24
24
B
147 156Right-handed alpha
Helix 25
25
B
169 180Right-handed alpha
Helix 26
26
B
189 191Right-handed 310
Helix 27
27
B
192 199Right-handed alpha
Helix 28
28
B
208 213Right-handed alpha
Helix 29
29
B
212 225Right-handed alpha
Helix 30
30
B
227 249Right-handed alpha
Helix 31
31
B
249 260Right-handed alpha
Helix 32
32
B
277 292Right-handed alpha
Helix 33
33
C
22 36Right-handed alpha
Helix 34
34
C
46 50Right-handed 310
Helix 35
35
C
50 54Right-handed 310
Helix 36
36
C
55 71Right-handed alpha
Helix 37
37
C
84 99Right-handed alpha
Helix 38
38
C
114 130Right-handed alpha
Helix 39
39
C
138 143Right-handed alpha
Helix 40
40
C
147 156Right-handed alpha
Helix 41
41
C
169 180Right-handed alpha
Helix 42
42
C
189 191Right-handed 310
Helix 43
43
C
192 199Right-handed alpha
Helix 44
44
C
208 213Right-handed alpha
Helix 45
45
C
212 225Right-handed alpha
Helix 46
46
C
227 249Right-handed alpha
Helix 47
47
C
249 260Right-handed alpha
Helix 48
48
C
277 292Right-handed alpha
Helix 49
49
D
22 36Right-handed alpha
Helix 50
50
D
46 50Right-handed 310
Helix 51
51
D
50 54Right-handed 310
Helix 52
52
D
55 71Right-handed alpha
Helix 53
53
D
84 99Right-handed alpha
Helix 54
54
D
114 130Right-handed alpha
Helix 55
55
D
138 143Right-handed alpha
Helix 56
56
D
147 156Right-handed alpha
Helix 57
57
D
169 180Right-handed alpha
Helix 58
58
D
189 191Right-handed 310
Helix 59
59
D
192 199Right-handed alpha
Helix 60
60
D
208 213Right-handed alpha
Helix 61
61
D
212 225Right-handed alpha
Helix 62
62
D
227 249Right-handed alpha
Helix 63
63
D
249 261Right-handed alpha
Helix 64
64
D
277 292Right-handed alpha
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There are 4 sheets in PDB entry 1F5Z. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
41 44parallel
Strand 3
A
75 79parallel
Strand 4
A
102 106parallel
Strand 5
A
133 137parallel
Strand 6
A
160 165parallel
Strand 7
A
184 187parallel
Strand 8
A
203 206parallel
Strand 9
A
6 10parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 10first strand
Strand 2
B
41 44parallel
Strand 3
B
75 79parallel
Strand 4
B
102 104parallel
Strand 5
B
133 136parallel
Strand 6
B
160 165parallel
Strand 7
B
184 187parallel
Strand 8
B
203 206parallel
Strand 9
B
6 10parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 10first strand
Strand 2
C
41 44parallel
Strand 3
C
75 79parallel
Strand 4
C
102 104parallel
Strand 5
C
133 136parallel
Strand 6
C
160 165parallel
Strand 7
C
184 187parallel
Strand 8
C
203 206parallel
Strand 9
C
6 10parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 10first strand
Strand 2
D
41 44parallel
Strand 3
D
75 79parallel
Strand 4
D
102 106parallel
Strand 5
D
133 137parallel
Strand 6
D
160 165parallel
Strand 7
D
184 187parallel
Strand 8
D
203 206parallel
Strand 9
D
6 10parallel
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