Analysis of interatomic Contacts of Structural Units in PDB entry:
1F6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F6W entry

There is 1 chain in PDB entry 1F6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1THR 533
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1F6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
127 135Right-handed alpha
Helix 2
2
A
146 151Right-handed alpha
Helix 3
3
A
161 178Right-handed alpha
Helix 4
4
A
194 205Right-handed alpha
Helix 5
5
A
233 244Right-handed alpha
Helix 6
6
A
251 261Right-handed alpha
Helix 7
7
A
262 269Right-handed alpha
Helix 8
8
A
321 329Right-handed alpha
Helix 9
9
A
340 352Right-handed alpha
Helix 10
10
A
356 368Right-handed alpha
Helix 11
12
A
438 444Right-handed alpha
Helix 12
13
A
455 475Right-handed 310
Helix 13
14
A
515 527Right-handed alpha
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There are 2 sheets in PDB entry 1F6W. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 8first strand
Strand 2
A
11 15anti-parallel
Strand 3
A
54 56parallel
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There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 20first strand
Strand 2
A
25 34anti-parallel
Strand 3
A
81 90anti-parallel
Strand 4
A
137 142anti-parallel
Strand 5
A
98 104parallel
Strand 6
A
183 193parallel
Strand 7
A
215 220parallel
Strand 8
A
311 318parallel
Strand 9
A
412 419parallel
Strand 10
A
498 501parallel
Strand 11
A
509 511anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il