Analysis of interatomic Contacts of Structural Units in PDB entry:
1F6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F6Y entry

There are 2 chains in PDB entry 1F6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 262
B
 MET 1ARG 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 1F6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 22Right-handed alpha
Helix 2
2
A
23 38Right-handed alpha
Helix 3
3
A
52 66Right-handed alpha
Helix 4
4
A
78 89Right-handed alpha
Helix 5
5
A
101 115Right-handed alpha
Helix 6
6
A
132 151Right-handed alpha
Helix 7
7
A
153 155Right-handed 310
Helix 8
8
A
171 185Right-handed alpha
Helix 9
9
A
198 202Right-handed 310
Helix 10
10
A
206 221Right-handed alpha
Helix 11
11
A
232 246Right-handed alpha
Helix 12
12
A
254 262Right-handed alpha
Helix 13
13
B
12 21Right-handed alpha
Helix 14
14
B
24 38Right-handed alpha
Helix 15
15
B
52 66Right-handed alpha
Helix 16
16
B
78 87Right-handed alpha
Helix 17
17
B
101 115Right-handed alpha
Helix 18
18
B
132 150Right-handed alpha
Helix 19
19
B
153 155Right-handed 310
Helix 20
20
B
171 184Right-handed alpha
Helix 21
21
B
196 202Right-handed 310
Helix 22
22
B
206 221Right-handed alpha
Helix 23
23
B
232 246Right-handed alpha
Helix 24
24
B
254 262Right-handed alpha
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There are 2 sheets in PDB entry 1F6Y. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
41 44parallel
Strand 3
A
71 75parallel
Strand 4
A
93 98parallel
Strand 5
A
118 122parallel
Strand 6
A
157 160parallel
Strand 7
A
192 196parallel
Strand 8
A
225 228parallel
Strand 9
A
2 5parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 5first strand
Strand 2
B
41 45parallel
Strand 3
B
71 75parallel
Strand 4
B
93 98parallel
Strand 5
B
118 122parallel
Strand 6
B
157 160parallel
Strand 7
B
192 195parallel
Strand 8
B
225 228parallel
Strand 9
B
2 5parallel
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