Analysis of interatomic Contacts of Structural Units in PDB entry:
1F8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1F8X entry

There are 2 chains in PDB entry 1F8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2TYR 157
B
 PRO 202TYR 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 1F8X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 31Right-handed alpha
Helix 2
2
A
35 39Right-handed 310
Helix 3
3
A
41 45Right-handed 310
Helix 4
4
A
46 50Right-handed 310
Helix 5
5
A
55 59Right-handed 310
Helix 6
6
A
61 79Right-handed alpha
Helix 7
7
A
92 105Right-handed alpha
Helix 8
8
A
114 118Right-handed 310
Helix 9
9
A
123 130Right-handed alpha
Helix 10
10
A
137 139Right-handed 310
Helix 11
11
B
214 231Right-handed alpha
Helix 12
12
B
241 246Right-handed 310
Helix 13
13
B
246 250Right-handed 310
Helix 14
14
B
251 255Right-handed 310
Helix 15
15
B
255 260Right-handed 310
Helix 16
16
B
261 278Right-handed alpha
Helix 17
17
B
287 291Right-handed 310
Helix 18
18
B
292 305Right-handed alpha
Helix 19
19
B
323 330Right-handed alpha
Helix 20
20
B
337 342Right-handed 310
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There are 2 sheets in PDB entry 1F8X. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
81 85parallel
Strand 3
A
108 113parallel
Strand 4
A
132 135parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 209first strand
Strand 2
B
281 285parallel
Strand 3
B
308 313parallel
Strand 4
B
332 335parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il