Analysis of interatomic Contacts of Structural Units in PDB entry:
1FBA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FBA entry

There are 4 chains in PDB entry 1FBA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 1TYR 363
B
 THR 1TYR 363
C
 THR 1TYR 363
D
 THR 1TYR 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 60 helices in PDB entry 1FBA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1I
A
9 22Right-handed alpha
Helix 2
1A1
A
36 45Right-handed alpha
Helix 3
1A2
A
52 63Right-handed alpha
Helix 4
1A3
A
67 71Right-handed 310
Helix 5
1B1
A
80 83Right-handed alpha
Helix 6
1B2
A
93 99Right-handed alpha
Helix 7
1C
A
130 139Right-handed alpha
Helix 8
1D
A
160 179Right-handed alpha
Helix 9
1E1
A
198 218Right-handed alpha
Helix 10
1E2
A
223 225Right-handed 310
Helix 11
1F
A
245 259Right-handed alpha
Helix 12
1G
A
276 286Right-handed alpha
Helix 13
1H1
A
303 305Right-handed 310
Helix 14
1H2
A
307 313Right-handed alpha
Helix 15
1H3
A
320 337Right-handed alpha
Helix 16
2I
B
9 22Right-handed alpha
Helix 17
2A1
B
36 44Right-handed alpha
Helix 18
2A2
B
52 63Right-handed alpha
Helix 19
2A3
B
67 71Right-handed 310
Helix 20
2B1
B
80 83Right-handed alpha
Helix 21
2B2
B
93 99Right-handed alpha
Helix 22
2C
B
130 139Right-handed alpha
Helix 23
2D
B
160 179Right-handed alpha
Helix 24
2E1
B
198 218Right-handed alpha
Helix 25
2E2
B
223 225Right-handed 310
Helix 26
2F
B
245 259Right-handed alpha
Helix 27
2G
B
276 286Right-handed alpha
Helix 28
2H1
B
303 313Right-handed alpha
Helix 29
2H2
B
317 319Right-handed 310
Helix 30
2H3
B
320 337Right-handed alpha
Helix 31
3I
C
9 22Right-handed alpha
Helix 32
3A1
C
36 45Right-handed alpha
Helix 33
3A2
C
52 64Right-handed alpha
Helix 34
3A3
C
67 71Right-handed 310
Helix 35
3B1
C
82 84Right-handed 310
Helix 36
3B2
C
93 99Right-handed alpha
Helix 37
3C
C
130 139Right-handed alpha
Helix 38
3D
C
160 179Right-handed alpha
Helix 39
3E1
C
198 218Right-handed alpha
Helix 40
3E2
C
223 225Right-handed 310
Helix 41
3F
C
245 259Right-handed alpha
Helix 42
3G
C
276 286Right-handed alpha
Helix 43
3H1
C
303 313Right-handed alpha
Helix 44
3H2
C
317 319Right-handed 310
Helix 45
3H3
C
320 337Right-handed alpha
Helix 46
4I
D
9 22Right-handed alpha
Helix 47
4A1
D
36 45Right-handed alpha
Helix 48
4A2
D
52 63Right-handed alpha
Helix 49
4A3
D
67 71Right-handed 310
Helix 50
4B1
D
80 83Right-handed alpha
Helix 51
4B2
D
93 99Right-handed alpha
Helix 52
4C
D
130 139Right-handed alpha
Helix 53
4D
D
160 179Right-handed alpha
Helix 54
4E1
D
198 218Right-handed alpha
Helix 55
4E2
D
223 225Right-handed 310
Helix 56
4F
D
245 259Right-handed alpha
Helix 57
4G
D
276 286Right-handed alpha
Helix 58
4H1
D
303 313Right-handed alpha
Helix 59
4H2
D
317 319Right-handed 310
Helix 60
4H3
D
320 337Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 1FBA. Click on sheet of interest to get list of strands forming it: PS1, AS1, PS2, AS2, PS3, AS3, PS4, AS4,

There are 8 strands in PS1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 107first strand
Strand 2
A
73 78parallel
Strand 3
A
28 32parallel
Strand 4
A
296 301parallel
Strand 5
A
266 269parallel
Strand 6
A
227 228parallel
Strand 7
A
183 190parallel
Strand 8
A
142 151parallel
Back to list of sheets
Back to top of page

There are 2 strands in AS1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 114first strand
Strand 2
A
122 124anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in PS2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 107first strand
Strand 2
B
73 78parallel
Strand 3
B
28 32parallel
Strand 4
B
296 301parallel
Strand 5
B
266 269parallel
Strand 6
B
227 228parallel
Strand 7
B
183 190parallel
Strand 8
B
142 151parallel
Back to list of sheets
Back to top of page

There are 2 strands in AS2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
112 114first strand
Strand 2
B
122 124anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in PS3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
103 107first strand
Strand 2
C
73 78parallel
Strand 3
C
28 32parallel
Strand 4
C
296 301parallel
Strand 5
C
266 269parallel
Strand 6
C
227 228parallel
Strand 7
C
183 190parallel
Strand 8
C
142 151parallel
Back to list of sheets
Back to top of page

There are 2 strands in AS3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
112 114first strand
Strand 2
C
122 124anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in PS4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
103 107first strand
Strand 2
D
73 78parallel
Strand 3
D
28 32parallel
Strand 4
D
296 301parallel
Strand 5
D
266 269parallel
Strand 6
D
227 228parallel
Strand 7
D
183 190parallel
Strand 8
D
142 151parallel
Back to list of sheets
Back to top of page

There are 2 strands in AS4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
112 114first strand
Strand 2
D
122 124anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il